S
Snezana Drmanac
Researcher at Argonne National Laboratory
Publications - 27
Citations - 3032
Snezana Drmanac is an academic researcher from Argonne National Laboratory. The author has contributed to research in topics: Sequencing by hybridization & DNA sequencing. The author has an hindex of 17, co-authored 27 publications receiving 2880 citations.
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Journal ArticleDOI
Human Genome Sequencing Using Unchained Base Reads on Self-Assembling DNA Nanoarrays
Radoje Drmanac,Andrew B. Sparks,Matthew J. Callow,Aaron L. Halpern,Norman L. Burns,Bahram G. Kermani,Paolo Carnevali,Igor Nazarenko,Geoffrey B. Nilsen,George Yeung,Fredrik A. Dahl,Andres Fernandez,Bryan Staker,Krishna Pant,Jonathan Baccash,Adam P. Borcherding,Anushka Brownley,Ryan J. Cedeno,Linsu Chen,Daniel F. Chernikoff,Alex Cheung,Razvan Chirita,Benjamin Curson,Jessica Ebert,Coleen R. Hacker,Robert Hartlage,Brian Hauser,Steve Huang,Yuan Jiang,Vitali Karpinchyk,Mark Koenig,Calvin Kong,Tom Landers,Catherine Le,Jia Liu,Celeste E. McBride,Matt Morenzoni,Robert E. Morey,Karl Mutch,Helena Perazich,Kimberly Perry,Brock A. Peters,Joe Peterson,Charit L. Pethiyagoda,Kaliprasad Pothuraju,Claudia Richter,Abraham M. Rosenbaum,Shaunak Roy,Jay Shafto,Uladzislau Sharanhovich,Karen W. Shannon,Conrad G. Sheppy,Michel Sun,Joseph V. Thakuria,Anne Tran,Dylan Vu,Alexander Wait Zaranek,Xiaodi Wu,Snezana Drmanac,Arnold R. Oliphant,William C. Banyai,Bruce L. Martin,Dennis G. Ballinger,George M. Church,Clifford Reid +64 more
TL;DR: A genome sequencing platform that achieves efficient imaging and low reagent consumption with combinatorial probe anchor ligation chemistry to independently assay each base from patterned nanoarrays of self-assembling DNA nanoballs is described.
Journal ArticleDOI
DNA sequence determination by hybridization: A strategy for efficient large-scale sequencing
Radoje Drmanac,Snezana Drmanac,Z. Strezoska,Z. Strezoska,Tatjana Paunesku,Ivan Labat,Ivan Labat,M. Zeremski,M. Zeremski,J. Snoddy,W. K. Funkhouser,Ben F. Koop,Ben F. Koop,Leroy Hood,Leroy Hood,R. Crkvenjakov +15 more
TL;DR: The concept of sequencing by hybridization (SBH) makes use of an array of all possible n-nucleotide oligomers (n-mers) to identify n-mers present in an unknown DNA sequence and may accelerate the mapping and sequencing phases of the human genome project.
Journal ArticleDOI
Accurate sequencing by hybridization for DNA diagnostics and individual genomics.
Snezana Drmanac,David Kita,Ivan Labat,Brian K. Hauser,Carl J. Schmidt,John D. Burczak,Radoje Drmanac +6 more
TL;DR: This SBH variant offers a high throughput platform to inexpensively sequence individual gene or pathogen genome samples within the clinical laboratory setting and is validated by four repeated, blind experiments.
Book ChapterDOI
Sequencing by hybridization (SBH): advantages, achievements, and opportunities.
Radoje Drmanac,Snezana Drmanac,Gloria Chui,Robert Diaz,Aaron Hou,Hui Jin,Paul Jin,Sunhee Kwon,Scott Lacy,Bill Moeur,Jay Shafto,Don Swanson,Tatjana Ukrainczyk,Chongjun Xu,Deane Little +14 more
TL;DR: Future advances in biochemistry and implementation of detection methods that allow single-molecule sensitivity may provide the necessary miniaturization, specificity, and multiplexing efficiency to allow routine whole genome analysis in a single solution-based hybridization experiment.
Journal ArticleDOI
Reliable hybridization of oligonucleotides as short as six nucleotides.
TL;DR: Low-temperature hybridization and washing conditions, in contrast to the high stringency conditions currently used in hybridization experiments, have the potential for allowing the simple use of all oligos of six nucleotides or longer in meaningful hybridizations.