S
Stephan Weise
Researcher at Leibniz Association
Publications - 46
Citations - 1150
Stephan Weise is an academic researcher from Leibniz Association. The author has contributed to research in topics: Hordeum vulgare & Information system. The author has an hindex of 16, co-authored 46 publications receiving 866 citations. Previous affiliations of Stephan Weise include Leibniz Institute for Neurobiology & Martin Luther University of Halle-Wittenberg.
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Journal ArticleDOI
Genebank genomics highlights the diversity of a global barley collection
Sara Giulia Milner,Matthias Jost,Matthias Jost,Shin Taketa,Elena Rey Mazón,Axel Himmelbach,Markus Oppermann,Stephan Weise,Helmut Knüpffer,Martin Basterrechea,Patrick König,Danuta Schüler,Rajiv Sharma,Rajiv Sharma,Raj K. Pasam,Twan Rutten,Ganggang Guo,Dongdong Xu,Jing Zhang,Gerhard Herren,Thomas Müller,Simon G. Krattinger,Simon G. Krattinger,Beat Keller,Yong Jiang,Maria Y. Gonzalez,Yusheng Zhao,Antje Habekuß,Sandra Färber,Frank Ordon,Matthias Lange,Andreas Börner,Andreas Graner,Jochen C. Reif,Uwe Scholz,Martin Mascher,Nils Stein,Nils Stein +37 more
TL;DR: The analysis of genome-wide genotyping-by-sequencing data for almost all barley accessions of the German ex situ genebank provides insights into the global population structure of domesticated barley and points out redundancies and coverage gaps in one of the world’s major genebanks.
Journal ArticleDOI
Towards recommendations for metadata and data handling in plant phenotyping
Paweł Krajewski,Dijun Chen,Hanna Ćwiek,Aalt D. J. van Dijk,Fabio Fiorani,Paul J. Kersey,Christian Klukas,Matthias Lange,Augustyn Markiewicz,Jan-Peter Nap,Jan van Oeveren,Cyril Pommier,Uwe Scholz,Marco van Schriek,Björn Usadel,Björn Usadel,Stephan Weise +16 more
TL;DR: The current situation of standardization in the area of phenomics is discussed, the problems and shortages are pointed out, and the areas that would benefit from improvement are presented.
Journal ArticleDOI
Measures for interoperability of phenotypic data: minimum information requirements and formatting
Hanna Ćwiek-Kupczyńska,Thomas Altmann,Daniel Arend,Elizabeth Arnaud,Dijun Chen,Guillaume Cornut,Fabio Fiorani,Wojciech Frohmberg,Wojciech Frohmberg,Astrid Junker,Christian Klukas,Matthias Lange,Cezary Mazurek,Anahita Nafissi,Pascal Neveu,Jan van Oeveren,Cyril Pommier,Hendrik Poorter,Philippe Rocca-Serra,Susanna-Assunta Sansone,Uwe Scholz,Marco van Schriek,Ümit Seren,Björn Usadel,Björn Usadel,Stephan Weise,Paul J. Kersey,Paweł Krajewski +27 more
TL;DR: This paper proposes the guidelines for proper handling of the information about plant phenotyping experiments, in terms of both the recommended content of the description and its formatting, and provides examples of ISA-Tab-formatted phenotypic data.
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Enabling reusability of plant phenomic datasets with MIAPPE 1.1
Evangelia Papoutsoglou,Daniel Faria,Daniel Faria,Daniel Arend,Elizabeth Arnaud,Ioannis N. Athanasiadis,Inês Chaves,Frederik Coppens,Guillaume Cornut,Bruno Costa,Bruno Costa,Hanna Ćwiek-Kupczyńska,Bert Droesbeke,Richard Finkers,Kristina Gruden,Astrid Junker,Graham J.W. King,Paweł Krajewski,Matthias Lange,Marie-Angélique Laporte,Célia Michotey,Markus Oppermann,Richard Ostler,Hendrik Poorter,Hendrik Poorter,Ricardo H. Ramirez-Gonzalez,Živa Ramšak,Jochen C. Reif,Philippe Rocca-Serra,Susanna-Assunta Sansone,Uwe Scholz,François Tardieu,Cristobal Uauy,Björn Usadel,Björn Usadel,Richard G. F. Visser,Stephan Weise,Paul J. Kersey,Célia Miguel,Célia Miguel,Anne-Françoise Adam-Blondon,Cyril Pommier +41 more
TL;DR: MIAPPE 1.1 marks a major step towards enabling plant phenotyping data reusability, thanks to its extended coverage, and especially the formalisation of its data model, which facilitates its implementation in different formats.
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EURISCO: The European search catalogue for plant genetic resources
TL;DR: The European Search Catalogue for Plant Genetic Resources, EURISCO, provides information about 1.8 million crop plant accessions preserved by almost 400 institutes in Europe and beyond and represents an important effort for the preservation of world's agrobiological diversity.