T
Thilo Eickhorst
Researcher at University of Bremen
Publications - 36
Citations - 5020
Thilo Eickhorst is an academic researcher from University of Bremen. The author has contributed to research in topics: Soil structure & Soil water. The author has an hindex of 20, co-authored 36 publications receiving 4012 citations.
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Journal ArticleDOI
Defining the core Arabidopsis thaliana root microbiome
Derek S. Lundberg,Sarah L. Lebeis,Sur Herrera Paredes,Scott Yourstone,Jase Gehring,Stephanie Malfatti,Julien Tremblay,Anna Engelbrektson,Anna Engelbrektson,Victor Kunin,Victor Kunin,Tijana Glavina del Rio,Robert C. Edgar,Thilo Eickhorst,Ruth E. Ley,Philip Hugenholtz,Philip Hugenholtz,Susannah G. Tringe,Jeffery L. Dangl +18 more
TL;DR: The pyrosequencing of the bacterial 16S ribosomal RNA gene of more than 600 Arabidopsis thaliana plants is reported to test the hypotheses that the root rhizosphere and endophytic compartment microbiota of plants grown under controlled conditions in natural soils are sufficiently dependent on the host to remain consistent across different soil types and developmental stages.
Journal ArticleDOI
Revealing structure and assembly cues for Arabidopsis root-inhabiting bacterial microbiota
Davide Bulgarelli,Matthias Rott,Klaus Schlaeppi,Emiel Ver Loren van Themaat,Nahal Ahmadinejad,Federica Assenza,Philipp Rauf,Bruno Huettel,Richard Reinhardt,Elmon Schmelzer,Joerg Peplies,Frank Oliver Gloeckner,Rudolf Amann,Thilo Eickhorst,Paul Schulze-Lefert +14 more
TL;DR: Methodology is described to characterize and compare soil- and root-inhabiting bacterial communities, which reveals not only a function for metabolically active plant cells but also for inert cell-wall features in the selection of soil bacteria for host colonization.
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Emergent Properties of Microbial Activity in Heterogeneous Soil Microenvironments: Different Research Approaches Are Slowly Converging, Yet Major Challenges Remain.
Philippe C. Baveye,Wilfred Otten,Alexandra Kravchenko,María Balseiro-Romero,María Balseiro-Romero,Eléonore Beckers,Maha Chalhoub,Christophe Darnault,Thilo Eickhorst,Patricia Garnier,Simona M. Hapca,Serkan Kiranyaz,Olivier Monga,Carsten W. Mueller,Naoise Nunan,Valérie Pot,Steffen Schlüter,Hannes Schmidt,Hans-Jörg Vogel +18 more
TL;DR: The objective of the present article is to review progress achieved to date in the significant research program that has ensued, namely the quantification and modeling of the physical-, (bio)chemical-, and microbiological properties of soils, and the integration of these different perspectives into a unified theory.
Journal ArticleDOI
Improved detection of soil microorganisms using fluorescence in situ hybridization (FISH) and catalyzed reporter deposition (CARD-FISH)
Thilo Eickhorst,Rolf Tippkötter +1 more
TL;DR: The results show that both cell permeabilization and TSA are two important factors which improve in situ hybridization of soil microorganisms.
Journal ArticleDOI
Detection of soil water in macropores of undisturbed soil using microfocus X-ray tube computerized tomography (μCT)
TL;DR: In this paper, a micro-focus X-ray tube computerized tomography (μCT) was used to generate images of the internal structure of the soil with a resolution down to 1μm, while creating a visual image of the spatial distribution of water in undisturbed soils.