T
Tijana Glavina del Rio
Researcher at Joint Genome Institute
Publications - 169
Citations - 9058
Tijana Glavina del Rio is an academic researcher from Joint Genome Institute. The author has contributed to research in topics: Genome & Whole genome sequencing. The author has an hindex of 36, co-authored 163 publications receiving 7150 citations. Previous affiliations of Tijana Glavina del Rio include Lawrence Livermore National Laboratory & Oak Ridge National Laboratory.
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Journal ArticleDOI
Defining the core Arabidopsis thaliana root microbiome
Derek S. Lundberg,Sarah L. Lebeis,Sur Herrera Paredes,Scott Yourstone,Jase Gehring,Stephanie Malfatti,Julien Tremblay,Anna Engelbrektson,Anna Engelbrektson,Victor Kunin,Victor Kunin,Tijana Glavina del Rio,Robert C. Edgar,Thilo Eickhorst,Ruth E. Ley,Philip Hugenholtz,Philip Hugenholtz,Susannah G. Tringe,Jeffery L. Dangl +18 more
TL;DR: The pyrosequencing of the bacterial 16S ribosomal RNA gene of more than 600 Arabidopsis thaliana plants is reported to test the hypotheses that the root rhizosphere and endophytic compartment microbiota of plants grown under controlled conditions in natural soils are sufficiently dependent on the host to remain consistent across different soil types and developmental stages.
Journal ArticleDOI
Salicylic acid modulates colonization of the root microbiome by specific bacterial taxa
Sarah L. Lebeis,Sarah L. Lebeis,Sur Herrera Paredes,Derek S. Lundberg,Natalie W. Breakfield,Jase Gehring,Meredith McDonald,Stephanie Malfatti,Tijana Glavina del Rio,Corbin D. Jones,Susannah G. Tringe,Jeffery L. Dangl +11 more
TL;DR: It is established that biosynthesis of, and signaling dependent on, the foliar defense phytohormone salicylic acid is required to assemble a normal root microbiome, and selection from the available microbial communities to sculpt the root microbiome.
Journal ArticleDOI
Host genotype and age shape the leaf and root microbiomes of a wild perennial plant
Maggie R. Wagner,Derek S. Lundberg,Tijana Glavina del Rio,Susannah G. Tringe,Jeffery L. Dangl,Thomas Mitchell-Olds +5 more
TL;DR: This large-scale field experiment disentangle the effects of genotype, environment, age and year of harvest on bacterial communities associated with leaves and roots of Boechera stricta (Brassicaceae), a perennial wild mustard to demonstrate how genotype-by-environment interactions contribute to the complexity of microbiome assembly in natural environments.
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Genomic features of bacterial adaptation to plants.
Asaf Levy,Isai Salas González,Isai Salas González,Maximilian Mittelviefhaus,Scott Clingenpeel,Sur Herrera Paredes,Sur Herrera Paredes,Sur Herrera Paredes,Jiamin Miao,Jiamin Miao,Kunru Wang,Giulia Devescovi,Kyra Stillman,Freddy Monteiro,Freddy Monteiro,Bryan Rangel Alvarez,Derek S. Lundberg,Derek S. Lundberg,Tse-Yuan Lu,Sarah L. Lebeis,Zhao Jin,Meredith McDonald,Meredith McDonald,Andrew P. Klein,Andrew P. Klein,Meghan E. Feltcher,Meghan E. Feltcher,Meghan E. Feltcher,Tijana Glavina del Rio,Sarah R. Grant,Sharon L. Doty,Ruth E. Ley,Bingyu Zhao,Vittorio Venturi,Dale A. Pelletier,Julia A. Vorholt,Susannah G. Tringe,Susannah G. Tringe,Tanja Woyke,Tanja Woyke,Jeffery L. Dangl +40 more
TL;DR: This work sequenced 484 genomes of bacterial isolates from roots of Brassicaceae, poplar, and maize and validated candidates from two sets of plant-associated genes, including one involved in plant colonization and the other serving in microbe–microbe competition between plant and microbe.
Journal ArticleDOI
Large-scale replicated field study of maize rhizosphere identifies heritable microbes
William A. Walters,Zhao Jin,Nicholas D. Youngblut,Jason G. Wallace,Jessica L. Sutter,Wei Zhang,Antonio González-Peña,Jason A. Peiffer,Omry Koren,Omry Koren,Qiaojuan Shi,Rob Knight,Rob Knight,Tijana Glavina del Rio,Susannah G. Tringe,Edward S. Buckler,Edward S. Buckler,Jeffery L. Dangl,Ruth E. Ley,Ruth E. Ley +19 more
TL;DR: Plant genetic effects were significant amid the large effects of plant age on the rhizosphere microbiome, regardless of the specific community of each field, and despite microbiome responses to climate events.