Thomas Lengauer

TL;DR: UNLABELLED ROCR is a package for evaluating and visualizing the performance of scoring classifiers in the statistical language R that features over 25 performance measures that can be freely combined to create two-dimensional performance curves.

TL;DR: This work presents an automatic method for docking organic ligands into protein binding sites that combines an appropriate model of the physico-chemical properties of the docked molecules with efficient methods for sampling the conformational space of the ligand.

TL;DR: Data suggest that the underlying biological process may be specific to Crohn disease, and that marker rs2241880, a coding SNP (T300A), carries virtually all the disease risk exerted by the ATG16L1 locus.

TL;DR: Two novel algorithms that improve GO group scoring using the underlying GO graph topology are presented and it is shown that both methods eliminate local dependencies between GO terms and point to relevant areas in the GO graph that remain undetected with state-of-the-art algorithms for scoring functional terms.

TL;DR: The versatile Cytoscape plugin NetworkAnalyzer computes and displays a comprehensive set of topological parameters, which includes the number of nodes, edges, and connected components, the network diameter, radius, density, centralization, heterogeneity, and clustering coefficient, and the characteristic path length.