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Xiaofeng Wang
Researcher at Université de Montréal
Publications - 10
Citations - 958
Xiaofeng Wang is an academic researcher from Université de Montréal. The author has contributed to research in topics: RNA & Non-coding RNA. The author has an hindex of 8, co-authored 10 publications receiving 550 citations.
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Journal ArticleDOI
A large-scale binding and functional map of human RNA-binding proteins
Eric L. Van Nostrand,Peter Freese,Gabriel A. Pratt,Xiaofeng Wang,Xintao Wei,Rui Xiao,Rui Xiao,Steven M. Blue,Jia-Yu Chen,Neal A.L. Cody,Daniel Dominguez,Sara Olson,Balaji Sundararaman,Lijun Zhan,Cassandra Bazile,Louis Philip Benoit Bouvrette,Julie Bergalet,Michael O. Duff,Keri E. Garcia,Chelsea Gelboin-Burkhart,Myles Hochman,Nicole J. Lambert,Hairi Li,Michael P. McGurk,Thai B. Nguyen,Tsultrim Palden,Ines Rabano,Shashank Sathe,Rebecca Stanton,Amanda Su,Ruth Wang,Brian A. Yee,Bing Zhou,Ashley L. Louie,Stefan Aigner,Xiang-Dong Fu,Eric Lécuyer,Eric Lécuyer,Christopher B. Burge,Brenton R. Graveley,Gene W. Yeo +40 more
TL;DR: The spectrum of RBP binding throughout the transcriptome and the connections between these interactions and various aspects of RNA biology, including RNA stability, splicing regulation and RNA localization are described.
Posted ContentDOI
A Large-Scale Binding and Functional Map of Human RNA Binding Proteins
Eric L. Van Nostrand,Peter Freese,Gabriel A. Pratt,Xiaofeng Wang,Xintao Wei,Steven M. Blue,Daniel Dominguez,Neal A.L. Cody,Sara H. Olson,Balaji Sundararaman,Rui Xiao,Lijun Zhan,Cassandra Bazile,Louis Philip Benoit Bouvrette,Jia-Yu Chen,Michael O. Duff,Keri E. Garcia,Chelsea Gelboin-Burkhart,Abigail Hochman,Nicole J. Lambert,Hairi Li,Thai B. Nguyen,Tsultrim Palden,Ines Rabano,Shashank Sathe,Rebecca Stanton,Ashley L. Louie,Stefan Aigner,Julie Bergalet,Bing Zhou,Amanda Su,Ruth Wang,Brian A. Yee,Xiang-Dong Fu,Eric Lécuyer,Christopher B. Burge,Brenton R. Graveley,Gene W. Yeo +37 more
TL;DR: The mapping and characterization of RNA elements recognized by a large collection of human RBPs in K562 and HepG2 cells are described, expanding the catalog of functional elements encoded in the human genome by addition of a large set of elements that function at the RNA level through interaction with RBPs.
Journal ArticleDOI
Resources for the Comprehensive Discovery of Functional RNA Elements
Balaji Sundararaman,Lijun Zhan,Steven M. Blue,Rebecca Stanton,Keri Elkins,Sara Olson,Xintao Wei,Eric L. Van Nostrand,Gabriel A. Pratt,Stephanie C. Huelga,Brendan M. Smalec,Xiaofeng Wang,Eurie L. Hong,Jean M. Davidson,Eric Lécuyer,Brenton R. Graveley,Gene W. Yeo +16 more
TL;DR: A validated repository of 438 commercially available antibodies that interrogate 365 unique RBPs are developed that can characterize subcellular RBP localization and are invaluable to the broad scientific community.
Journal ArticleDOI
CeFra-seq reveals broad asymmetric mRNA and noncoding RNA distribution profiles in Drosophila and human cells.
Louis Philip Benoit Bouvrette,Neal A.L. Cody,Julie Bergalet,Fabio Alexis Lefebvre,Cédric Diot,Xiaofeng Wang,Mathieu Blanchette,Eric Lécuyer,Eric Lécuyer +8 more
TL;DR: Assessment of the prevalence and conservation of RNA asymmetric distribution on a transcriptome-wide scale in Drosophila and human cells and of fraction-specific mRNA populations reveals that the majority of cellular RNA species are asymmetrically distributed, in patterns that are broadly conserved evolutionarily.
Journal ArticleDOI
Developmentally Regulated Elimination of Damaged Nuclei Involves a Chk2-Dependent Mechanism of mRNA Nuclear Retention
Carole Iampietro,Julie Bergalet,Xiaofeng Wang,Neal A.L. Cody,Ashley Chin,Fabio Alexis Lefebvre,Mélanie Douziech,Henry M. Krause,Eric Lécuyer,Eric Lécuyer +9 more
TL;DR: It is shown that nuclear retention involves a Chk2-dependent mechanism of mRNA nuclear retention that is induced by DNA damage and prevents the translation of specific zygotic mRNAs encoding key mitotic, cytoskeletal, and nuclear proteins required to maintain nuclear viability.