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Journal ArticleDOI

A low-cost fluid-level synthesis for droplet-based microfluidic biochips integrating design convergence, contamination avoidance, and washing

TLDR
This paper focuses on the fluid level of DMFBs while considering design convergence, contamination avoidance, and washing issues, and obtained results are compared with several existing benchmarks.
Abstract
Droplet-based microfluidic biochips (or DMFBs) are rapidly becoming a revolutionizing lab-on-a-chip technology. Numerous application specific protocols bridging the cross-disciplinary fields necessitate DMFBs as their prime need. The main goal at the fluid level is to minimize bioassay schedule length. Also, for a safe assay outcome, contamination among droplet routes must be avoided. Size restriction of a chip and reconfigurable nature of the operational modules in DMFB introduce contaminated cells which necessarily require washing as an urgent need. As the sub-tasks of fluid level possess their own constraints for a successful DMFB design, rip-up and reiteration of sub-tasks may become unavoidable if all of those constraints are not satisfied mutually. To achieve a shorter time for chip realization a crucial need in fluid-level design is to avoid rip-up and re-iteration; hence, design convergence is to be incorporated that collectively considers the fluid-level sub-tasks, instead of solving them individually. Thus, this paper focuses on the fluid level of DMFBs while considering design convergence, contamination avoidance, and washing issues. Obtained results are compared with several existing benchmarks.

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Citations
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Journal ArticleDOI

Design Optimization for Programmable Microfluidic Devices Integrating Contamination Removal and Capacity-Wastage-Aware Washing

TL;DR: A design synthesis minimizing the amount of contamination is proposed which is followed by a model for wash optimization targeting to reduce wash time and total loss of capacity, while removing all the contaminations.
References
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Journal ArticleDOI

Electrowetting-based actuation of droplets for integrated microfluidics

TL;DR: In this paper, an alternative approach to microfluidics based upon the micromanipulation of discrete droplets of aqueous electrolyte by electrowetting is reported.
Journal ArticleDOI

Approximation Schemes for the Restricted Shortest Path Problem

TL;DR: This note contains two fully polynomial approximation schemes for the shortest path problem with an additional constraint and one of the algorithms presented here is stronglyPolynomial.
Book

Task Scheduling for Parallel Systems

Oliver Sinnen
TL;DR: The aim of this presentation is to clarify the role of graph representation in the development of scheduling, and to provide some examples of how this role has changed in the past few years.
Journal ArticleDOI

High-level synthesis of digital microfluidic biochips

TL;DR: This work proposes a system design methodology that attempts to apply classical high-level synthesis techniques to the design of digital microfluidic biochips and develops an optimal scheduling strategy based on integer linear programming and two heuristic techniques that scale well for large problem instances.
Proceedings ArticleDOI

Unified high-level synthesis and module placement for defect-tolerant microfluidic biochips

TL;DR: This work presents a synthesis methodology that unifies operation scheduling, resource binding, and module placement for such "digital" biochips and can also be used after fabrication to bypass defective cells in the microfluidic array.
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