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Journal ArticleDOI

An enzymatic [4+2] cyclization cascade creates the pentacyclic core of pyrroindomycins.

TLDR
An unprecedented enzymatic [4+2] cyclization cascade that has a central role in the biosynthesis of pyrroindomycins, which are pentacyclic spirotetramate natural products is reported and it is confirmed that homologs are functionally exchangeable.
Abstract
The [4+2] cycloaddition remains one of the most intriguing transformations in synthetic and natural products chemistry. In nature, however, there are remarkably few enzymes known to have this activity. We herein report an unprecedented enzymatic [4+2] cyclization cascade that has a central role in the biosynthesis of pyrroindomycins, which are pentacyclic spirotetramate natural products. Beginning with a linear intermediate that contains two pairs of 1,3-diene and alkene groups, the dedicated cyclases PyrE3 and PyrI4 act in tandem to catalyze the formation of two cyclohexene rings in the dialkyldecalin system and the tetramate spiro-conjugate of the molecules. The two cyclizations are completely enzyme dependent and proceed in a regio- and stereoselective manner to establish the enantiomerically pure pentacyclic core. Analysis of a related spirotetronate pathway confirms that homologs are functionally exchangeable, establishing the generality of these findings and explaining how nature creates diverse active molecules with similar rigid scaffolds.

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Citations
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Journal ArticleDOI

Oxidative Cyclization in Natural Product Biosynthesis

TL;DR: This Review examines the different strategies used by nature to create new intra(inter)molecular bonds via redox chemistry, with an emphasis on the former.
Journal ArticleDOI

Enzymatic Cascade Reactions in Biosynthesis.

TL;DR: Four types of enzymatic cascade reactions are discussed: those involving nucleophilic, electrophilic, pericyclic, and radical reactions, and two subtypes of enzymes that generate radical cascades exist at opposite ends of the oxygen abundance spectrum.
Journal ArticleDOI

Applications of OR/ECD/VCD to the structure elucidation of natural products

TL;DR: The principles and applicability of optical rotation, and electronic and vibrational circular dichroism aided by quantum chemical calculations are presented to determine absolute configuration and conformation through examples of stereochemical analysis of natural products with emphasis on the possibility of combined analysis and pitfalls for natural product chemists.
Journal ArticleDOI

Natural [4 + 2]-Cyclases

TL;DR: While mechanistic investigation of these enzymes is just beginning, recent studies have provided new insights with implications for understanding their biosynthetic roles, mechanisms of catalysis, and evolutionary origin.
References
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Book

Molecular Cloning: A Laboratory Manual

TL;DR: Molecular Cloning has served as the foundation of technical expertise in labs worldwide for 30 years as mentioned in this paper and has been so popular, or so influential, that no other manual has been more widely used and influential.
Journal ArticleDOI

I-TASSER: a unified platform for automated protein structure and function prediction

TL;DR: The iterative threading assembly refinement (I-TASSER) server is an integrated platform for automated protein structure and function prediction based on the sequence- to-structure-to-function paradigm.
Journal ArticleDOI

Polyketide and Nonribosomal Peptide Antibiotics: Modularity and Versatility

TL;DR: The modularity of the natural product assembly lines and permissivity of tailoring enzymes offer prospects for reprogramming to create novel antibiotics with optimized properties.
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