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Open AccessJournal ArticleDOI

Differential gene exchange between parapatric morphs of Littorina saxatilis detected using AFLP markers

TLDR
This work applies the technique of amplified fragment length polymorphism (AFLP) analysis to an intertidal snail whose populations display a cline in shell shape across vertical gradients on rocky shores and finds that about 5% of these loci show greater differentiation than expected, providing evidence of the effects of selection across the cline.
Abstract
Speciation requires the acquisition of reproductive isolation, and the circumstances under which this could evolve are of great interest. Are new species formed after the acquisition of generalized incompatibility arising between physically separated populations, or may they arise as a result of the action of disruptive selection beginning with the divergence of a rather restricted set of gene loci? Here we apply the technique of amplified fragment length polymorphism (AFLP) analysis to an intertidal snail whose populations display a cline in shell shape across vertical gradients on rocky shores. We compare the FST values for 306 AFLP loci with the distribution of FST estimated from a simulation model using values of mutation and migration derived from the data. We find that about 5% of these loci show greater differentiation than expected, providing evidence of the effects of selection across the cline, either direct or indirect through linkage. This is consistent with expectations from nonallopatric speciation models that propose an initial divergence of a small part of the genome driven by strong disruptive selection while divergence at other loci is prevented by gene flow. However, the pattern could also be the result of differential introgression after secondary contact.

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A Genome-Scan Method to Identify Selected Loci Appropriate for Both Dominant and Codominant Markers: A Bayesian Perspective

TL;DR: It is shown that the inclusion of isolated populations that underwent a strong bottleneck can lead to a high rate of false positives, and it is demonstrated that it is possible to avoid them by carefully choosing the populations that should be included in the analysis.
Journal ArticleDOI

Hybridization as an invasion of the genome

TL;DR: This work surveys studies of natural interspecific hybridization in plants and a variety of animals to show that limited invasions of the genome are widespread, with potentially important consequences in evolutionary biology, speciation, biodiversity, and conservation.
Journal ArticleDOI

The power and promise of population genomics: from genotyping to genome typing

TL;DR: The most useful contribution of the genomics model to population genetics will be improving inferences about population demography and evolutionary history.
Journal ArticleDOI

Genomics and the future of conservation genetics

TL;DR: This work identifies and discusses those problems for which genomics will be most valuable for curbing the accelerating worldwide loss of biodiversity and provides guidance on whichgenomics tools and approaches will bemost appropriate to use for different aspects of conservation.
Journal ArticleDOI

Divergent selection and heterogeneous genomic divergence.

TL;DR: It is concluded that divergent selection makes diverse contributions to heterogeneous genomic divergence, and the number, size, and distribution of genomic regions affected by selection varied substantially among studies, leading us to discuss the potential role of Divergent selection in the growth of regions of differentiation (i.e. genomic islands of divergence), a topic in need of future investigation.
References
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Journal ArticleDOI

AFLP: a new technique for DNA fingerprinting.

TL;DR: The AFLP technique provides a novel and very powerful DNA fingerprinting technique for DNAs of any origin or complexity that allows the specific co-amplification of high numbers of restriction fragments.
Book

Animal species and evolution

Ernst Mayr
Book

Randomization, Bootstrap and Monte Carlo Methods in Biology

TL;DR: The idea of a randomization test has been explored in the context of data analysis for a long time as mentioned in this paper, and it has been applied in a variety of applications in biology, such as single species ecology and community ecology.
Journal ArticleDOI

Genetic Differentiation and Estimation of Gene Flow from F -Statistics Under Isolation by Distance

TL;DR: In this paper, the use of isolation by distance models as a basis for the estimation of demographic parameters from measures of population subdivision was re-examined, and the results for values of F-statistics in one-dimensional models and coalescence times in 2D models were provided.
Journal Article

Animal species and evolution

G. A. Horridge
- 01 Jan 1964 - 
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