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Maps for the Visualization of high-dimensional Data Spaces

TLDR
The U-Matrix, as defined here, is a display of the density relationships in the data space using Pareto Density Estimation and can be used for a non-ambiguous display of a non planar neuron space.
Abstract
-The U-Matrix is a canonical tool for the display of distance structures in data space using emergent SOM (ESOM). The U-Matrix defined originally for planar map spaces is extended in this work to toroid neuron spaces. Embedding the neuron space in a finite but borderless space, such as a torus, avoids border effects of planar spaces. A planar display of a toroid map space disrupts, however, coherent U-Matrix structures. Tiling multiple instances of the U-Matrix solves this problem at the cost of multiple images of data points. The P-Matrix, as defined here, is a display of the density relationships in the data space using Pareto Density Estimation. While the P-Matrix is useful for clustering, it can also be used for a non-ambiguous display of a non planar neuron space. Centering the display for high density regions and removing ambiguous images of data points leads to U-Maps and P-Maps. U-Maps depict the distance structure of a data space as a borderless three dimensional landscape whose floor space is ordered according to the topology preserving features of ESOM. P-Maps display the density structures. Both maps are specially suited for data mining and knowledge discovery.

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Citations
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Proceedings ArticleDOI

Player modeling using self-organization in Tomb Raider: Underworld

TL;DR: The proposed approach automates, in part, the traditional user and play testing procedures followed in the game industry since it can inform game developers, in detail, if the players play the game as intended by the game design.
Journal ArticleDOI

Exploiting Data Topology in Visualization and Clustering of Self-Organizing Maps

TL;DR: This paper shows that data topology can be integrated into the visualization of the SOM and thereby provide a more elaborate view of the cluster structure than existing schemes, by introducing a weighted Delaunay triangulation and draping it over the SOM.
Journal ArticleDOI

Molecular surface representation using 3D Zernike descriptors for protein shape comparison and docking.

TL;DR: The 3D Zernike descriptor (3DZD), an emerging technique to describe molecular surfaces, is introduced, a series expansion of mathematical three-dimensional function which allows rapid comparison of surface shapes, which is sufficient for real-time structure database screening.
Proceedings Article

Databionic visualization of music collections according to perceptual distance

TL;DR: The MusicMiner system for organizing large collections of music with databionic mining techniques and the visualizations capabilities of the U-Map are demonstrated, displaying local sound differences based on the new audio features.
References
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Adaptive Control Processes: A Guided Tour

TL;DR: Adaptive Control Processes: A Guided Tour as mentioned in this paper is a guidebook for guided tours of control processes, with a focus on adaptive control processes, and a description of the tour.

Self-organizing map in Matlab: the SOM Toolbox

TL;DR: The SOM Toolbox is an implementation of the SOM and its visualization in the Matlab 5 computing environment and its performance in terms of computational load is evaluated and compared to a corresponding Cprogram.