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Journal ArticleDOI

Parasite and Host Erythrocyte Kinomics of Plasmodium Infection

Jack D. Adderley, +2 more
- 13 Feb 2021 - 
- Vol. 37, Iss: 6, pp 508-524
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TLDR
In this paper, an overview of the updated kinome of Plasmodium falciparum, the species that is the largest contributor to malaria mortality, and current knowledge pertaining to the function of parasite-encoded protein kinases during the parasite's life cycle is presented.
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This article is published in Trends in Parasitology.The article was published on 2021-02-13. It has received 13 citations till now. The article focuses on the topics: Kinome & Plasmodium falciparum.

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Citations
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Host-directed therapy, an untapped opportunity for antimalarial intervention.

TL;DR: Host-directed therapy (HDT) is gaining traction as a strategy to combat infectious diseases caused by viruses and intracellular bacteria, but its implementation in the context of parasitic diseases has received less attention as mentioned in this paper.
Journal ArticleDOI

How Many Is Enough? - Challenges of Multinucleated Cell Division in Malaria Parasites.

TL;DR: In this article, the authors provide a comparative quantification of merozoite numbers in several P. knowlesi and P. falciparum strains, and discuss the general processes that may regulate progeny number in the context of host-parasite interactions.
Posted ContentDOI

Gene-by-gene screen of the unknown proteins encoded on P. falciparum chromosome 3

TL;DR: The feasibility of gene-by-gene screens to elucidate the biology of malaria parasites and reveal critical parasite-specific processes of interest as drug targets is demonstrated.
Journal ArticleDOI

Gene-by-gene screen of the unknown proteins encoded on Plasmodium falciparum chromosome 3.

TL;DR: Rancati et al. as mentioned in this paper analyzed the cellular location, essentiality, function, and, in selected cases, interactome of all unknown non-secretory proteins encoded on an entire P. falciparum chromosome.
Journal ArticleDOI

Comparative analysis of the kinomes of Plasmodium falciparum, Plasmodium vivax and their host Homo sapiens

Jack D. Adderley, +1 more
- 26 Mar 2022 - 
TL;DR: In this paper , a structural-validated multiple sequence alignment (MSA) of the human kinome is used as a scaffold to assist the alignment of all protein kinase sequences from P. falciparum and P. vivax, and their assignment to specific kinase groups/families.
References
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Journal ArticleDOI

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies.

TL;DR: This work presents some of the most notable new features and extensions of RAxML, such as a substantial extension of substitution models and supported data types, the introduction of SSE3, AVX and AVX2 vector intrinsics, techniques for reducing the memory requirements of the code and a plethora of operations for conducting post-analyses on sets of trees.
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Jalview Version 2--a multiple sequence alignment editor and analysis workbench.

TL;DR: Jalview 2 is a system for interactive WYSIWYG editing, analysis and annotation of multiple sequence alignments that employs web services for sequence alignment, secondary structure prediction and the retrieval of alignments, sequences, annotation and structures from public databases and any DAS 1.53 compliant sequence or annotation server.
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The protein kinase family: conserved features and deduced phylogeny of the catalytic domains.

TL;DR: Phylogenetic mapping of the conserved protein kinase catalytic domains can serve as a useful first step in the functional characterization of these newly identified family members.
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Interactive tree of life (iTOL) v3: an online tool for the display and annotation of phylogenetic and other trees

TL;DR: ITOL 3 is the first tool which supports direct visualization of the recently proposed phylogenetic placements format, and its account system has been redesigned to simplify the management of trees in user-defined workspaces and projects.
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