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Structural basis for cold adaptation. Sequence, biochemical properties, and crystal structure of malate dehydrogenase from a psychrophile Aquaspirillium arcticum.

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TLDR
Structural comparison of Aa MDH and Tf MDH suggests that the increased relative flexibility of active site residues, favorable surface charge distribution for substrate and cofactor, and the reduced intersubunit ion pair interactions may be the major factors for the efficient catalytic activity of A a MDH at low temperatures.
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This article is published in Journal of Biological Chemistry.The article was published on 1999-04-23 and is currently open access. It has received 176 citations till now. The article focuses on the topics: Malate dehydrogenase.

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Journal ArticleDOI

Psychrophilic enzymes: Hot topics in cold adaptation

TL;DR: The ability to thrive at temperatures that are close to, or below, the freezing point of water requires a vast array of adaptations to maintain the metabolic rates and sustained growth compatible with life in these severe environmental conditions.
Journal ArticleDOI

Cold-adapted enzymes.

TL;DR: This review addresses the structure, function, and stability of cold-adapted enzymes, highlighting the challenges for immediate and future consideration.
Journal ArticleDOI

Cold-adapted enzymes: from fundamentals to biotechnology.

TL;DR: Using X-ray crystallography,Psychrophilic enzymes produced by cold-adapted microorganisms display a high catalytic efficiency and are most often, if not always, associated with high thermosensitivity.
Journal ArticleDOI

C-h⋯π-interactions in proteins

TL;DR: A non-redundant set of 1154 protein structures from the Protein Data Bank was examined with respect to close interactions between C-H-donor and pi-acceptor groups as mentioned in this paper.
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Extremophiles as a source for novel enzymes.

TL;DR: Novel developments in the cultivation and production of extremophiles, but also developments related to the cloning and expression of their genes in heterologous hosts, will increase the number of enzyme-driven transformations in chemical, food, pharmaceutical and other industrial applications.
References
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Book ChapterDOI

Processing of X-ray diffraction data collected in oscillation mode

TL;DR: The methods presented in the chapter have been applied to solve a large variety of problems, from inorganic molecules with 5 A unit cell to rotavirus of 700 A diameters crystallized in 700 × 1000 × 1400 A cell.
Journal ArticleDOI

Protein folding and association: insights from the interfacial and thermodynamic properties of hydrocarbons.

TL;DR: It is demonstrated in this work that the surface tension, water‐organic solvent, transfer‐free energies and the thermodynamics of melting of linear alkanes provide fundamental insights into the nonpolar driving forces for protein folding and protein binding reactions.
Journal ArticleDOI

Accurate Bond and Angle Parameters for X-ray Protein Structure Refinement

TL;DR: In this article, a statistical survey of X-ray structures of small compounds from the Cambridge Structural Database is used for the refinement of protein structures determined by X-Ray crystallography.
Journal ArticleDOI

Crystallographic R Factor Refinement by Molecular Dynamics

TL;DR: Test cases showed that the need for manual corrections during refinement of macromolecular crystal structures is reduced and the dynamics calculation moved residues that were misplaced by more than 3 angstroms into the correct positions without human intervention.
Journal ArticleDOI

Detection, delineation, measurement and display of cavities in macromolecular structures

TL;DR: The program can be used to detect unknown cavities or to delineate known cavities, either of which may be connected to the outside of the molecule or molecular assembly under study.
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