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Open AccessProceedings ArticleDOI

Using an adaptive gene network model for self-organizing multicellular behavior

TLDR
The proposed adaptive modeling approach can be a useful tool in the study of self-organizing behavior observed in other contexts in biology, including microbial pathogenesis, antibiotic resistance, embryonic development, tumor formation, etc.
Abstract
Using the transient interleukin (IL)-2 secretion of effector T helper (T eff ) cells as an example, we show that self-organizing multicellular behavior can be modeled and predicted by an adaptive gene network model. Incorporating an adaptation algorithm we established previously, we construct a network model that has the parameter values iteratively updated to cope with environmental change governed by diffusion and cell-cell interactions. In contrast to non-adaptive models, we find that the proposed adaptive model for individual T eff cells can generate transient IL-2 secretory behavior that is observed experimentally at the population level. The proposed adaptive modeling approach can be a useful tool in the study of self-organizing behavior observed in other contexts in biology, including microbial pathogenesis, antibiotic resistance, embryonic development, tumor formation, etc.

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Citations
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Journal ArticleDOI

Collaborative beamforming via diffusion adaptation based on tensor over array networks

TL;DR: This work develops a fully distributed collaborative beamforming algorithm incorporating the diffusion scheme for arrays endowed with the property of multi-linear translation invariance (MLTI), and derives the convergence constraint of the proposed algorithm.
Journal ArticleDOI

Digital Signal Processing and Control for the Study of Gene Networks.

TL;DR: The overall aim of this article is to introduce digital signal processing and control as a useful tool for the study of gene networks.
Proceedings ArticleDOI

Modeling collective & intelligent decision making of multi-cellular populations.

TL;DR: It is proposed that a multi-cellular adaptive network can convert unreliable decisions by individual cells into a more reliable cell-population decision, and demonstrated using the effector T helper population.
Proceedings ArticleDOI

Parallel computing for adaptive multi-cellular gene network modeling

TL;DR: It is suggested that a parallel computing scheme, which represents individual cells as high performance computing nodes, can be a useful tool for simulating self-organizing multi-cellular behavior in a more realistic way.
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