A
Alain Laederach
Researcher at University of North Carolina at Chapel Hill
Publications - 95
Citations - 4724
Alain Laederach is an academic researcher from University of North Carolina at Chapel Hill. The author has contributed to research in topics: RNA & Gene. The author has an hindex of 34, co-authored 88 publications receiving 4078 citations. Previous affiliations of Alain Laederach include New York State Department of Health & University of Neuchâtel.
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Ligand specificity modulated by prolyl imide bond Cis/Trans isomerization in the Itk SH2 domain: a quantitative NMR study.
TL;DR: A novel method of analyzing chemical shift perturbation and cross-peak volumes to measure the affinities of both ligands for each SH2 conformer is developed and finds that the cis imide bond containing SH2conformer exhibits a 3.5-fold higher affinity for the Itk SH3 domain compared with binding of the trans conformer to the same ligand.
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Single Molecule Cluster Analysis dissects splicing pathway conformational dynamics.
Mario Blanco,Joshua S. Martin,Matthew L. Kahlscheuer,Ramya Krishnan,John Abelson,Alain Laederach,Nils G. Walter +6 more
TL;DR: Single Molecule Cluster Analysis (SiMCAn), which utilizes hierarchical clustering of hidden Markov modeling–fitted single-molecule fluorescence resonance energy transfer (smFRET) trajectories to dissect the complex conformational dynamics of biomolecular machines, enables rapid interpretation of complex single- Molecule behaviors and should prove useful for the comprehensive analysis of a plethora of dynamic cellular machines.
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Automated docking of maltose, 2-deoxymaltose, and maltotetraose into the soybean β-amylase active site
TL;DR: Docking studies were carried out with both open and closed configurations of the β‐amylase mobile flap, a loop comprising residues 96 to 103, suggesting that it is only upon cleavage of the α‐1,4 linkage that optimal closed‐flap binding can occur with the crytallographically determined enzyme structure.
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Water adsorption in carbons described by the dubinin–astakhov and dubinin–serpinski equations
TL;DR: In this paper, the water adsorption isotherm of type IV, observed for a number of carbons near room temperature, can be decomposed into two contributions of types I and V. The corresponding isotherms can be treated as Dubinin-Astakhov equations.
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Sharing and archiving nucleic acid structure mapping data.
Philippe Rocca-Serra,Stanislav Bellaousov,Amanda Birmingham,Chen Cy,Pablo Cordero,Rhiju Das,Lauren Davis-Neulander,Caia D. S. Duncan,Matthew Halvorsen,Rob Knight,Rob Knight,Neocles B. Leontis,David H. Mathews,Justin Ritz,Jesse Stombaugh,Kevin M. Weeks,Craig L. Zirbel,Alain Laederach +17 more
TL;DR: A standard for reporting the results of single nucleotide resolution nucleic acid structure mapping experiments, or SNRNASMs, is developed and a schema for sharing nucleic acids chemical probing data is proposed that uses generic public servers for storing, retrieving, and searching the data.