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Benjamin Y. Smith
Researcher at Howard Hughes Medical Institute
Publications - 4
Citations - 463
Benjamin Y. Smith is an academic researcher from Howard Hughes Medical Institute. The author has contributed to research in topics: Helicase & Eukaryotic transcription. The author has an hindex of 4, co-authored 4 publications receiving 421 citations. Previous affiliations of Benjamin Y. Smith include Cornell University.
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Journal ArticleDOI
Single-Molecule Studies Reveal Dynamics of DNA Unwinding by the Ring-Shaped T7 Helicase
TL;DR: In insights into possible ways helicase activity is enhanced by associated proteins, an active unwinding model fully supports the data even though the helicase on its own does not unwind at its optimal rate.
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Dynamic regulation of transcription factors by nucleosome remodeling
Ming O. Li,Arjan Hada,Payel Sen,Lola Olufemi,Michael Hall,Benjamin Y. Smith,Scott Forth,Jeffrey N. McKnight,Ashok Kumar Patel,Gregory D. Bowman,Blaine Bartholomew,Michelle D. Wang +11 more
TL;DR: This study finds that a TF serves as a major barrier to ISW1a remodeling, and acts as a boundary for nucleosome repositioning, and provides direct evidence for a novel mechanism for both nucleosomes positioning regulation by bound TFs and TF regulation via dynamic repositioner of nucleosomal positioning.
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ATP-induced helicase slippage reveals highly coordinated subunits
Bo Sun,Bo Sun,Daniel S. Johnson,Daniel S. Johnson,Daniel S. Johnson,Gayatri Patel,Benjamin Y. Smith,Benjamin Y. Smith,Manjula Pandey,Smita S. Patel,Michelle D. Wang,Michelle D. Wang +11 more
TL;DR: Wang et al. as discussed by the authors used a single-molecule approach to monitor the behavior of hexameric helicase in the presence of ATP and deoxythymine triphosphate (dTTP).
Journal ArticleDOI
DNA Y structure: a versatile, multidimensional single molecule assay.
James T. Inman,Benjamin Y. Smith,Michael Hall,Robert A. Forties,Jing Jin,James P. Sethna,Michelle D. Wang +6 more
TL;DR: This work reports the development and utilization of a novel optical trapping assay based on a three-branch DNA construct, termed a “Y structure”, that allows precise, real-time tracking of multiple configurational changes and allows the visualization and precision mapping of complex interactions of biomechanical events.