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Byrappa Venkatesh
Researcher at Agency for Science, Technology and Research
Publications - 219
Citations - 17296
Byrappa Venkatesh is an academic researcher from Agency for Science, Technology and Research. The author has contributed to research in topics: Genome & Fugu. The author has an hindex of 57, co-authored 212 publications receiving 14556 citations. Previous affiliations of Byrappa Venkatesh include University of Cambridge & Institute of Molecular and Cell Biology.
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A compact cartilaginous fish model genome
TL;DR: The characterization of the relatively small genome of a cartilaginous fish, the elephant fish, is reported, and it is proposed as a model for whole-genome sequencing.
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STAT4 is a target of the hematopoietic zinc-finger transcription factor Ikaros in T cells.
TL;DR: In this article, the role of Ikaros binding elements in the human STAT4 promoter using Jurkat T cells was investigated, and it was shown that Ik is involved in the regulation of STAT4 in human T cells.
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Conserved linkage between the puffer fish (Fugu rubripes) and human genes for platelet-derived growth factor receptor and macrophage colony-stimulating factor receptor.
TL;DR: Cloned and sequenced the teleost homologs of the human genes encoding platelet-derived growth factor receptor-beta (PDGFR beta) and macrophage colony-stimulating factor 1 receptor (CSFIR) from the puffer fish Fugu rubripes revealed several short stretches of conserved sequences that may have a role in the regulation of expression of either or both of these closely linked genes.
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Fish-T1K (Transcriptomes of 1,000 Fishes) Project: large-scale transcriptome data for fish evolution studies
Ying Sun,Yu Huang,Xiaofeng Li,Carole C. Baldwin,Zhuocheng Zhou,Zhixiang Yan,Keith A. Crandall,Yong Zhang,Xiaomeng Zhao,Min Wang,Alex Wong,Chao Fang,Xinhui Zhang,Hai Huang,Jose V. Lopez,Kirk Kilfoyle,Guillermo Ortí,Byrappa Venkatesh,Qiong Shi +18 more
TL;DR: An international project known as the “Transcriptomes of 1,000 Fishes” (Fish-T1K) project has been established to generate RNA-seq transcriptome sequences for 1, thousand diverse species of ray-finned fishes.
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The emergence of the brain non-CpG methylation system in vertebrates.
Alex de Mendoza,Alex de Mendoza,Alex de Mendoza,Daniel Poppe,Daniel Poppe,Sam Buckberry,Sam Buckberry,Jahnvi Pflueger,Jahnvi Pflueger,Caroline B. Albertin,Caroline B. Albertin,Tasman Daish,Stéphanie Bertrand,Elisa de la Calle-Mustienes,José Luis Gómez-Skarmeta,Joseph R. Nery,Joseph R. Ecker,Boris Baer,Clifton W. Ragsdale,Frank Grützner,Hector Escriva,Byrappa Venkatesh,Ozren Bogdanovic,Ryan Lister,Ryan Lister +24 more
TL;DR: For instance, this paper found that non-CpG methylation plays a critical regulatory role in cognitive function, which is mediated by the binding of MeCP2, the transcriptional regulator that when mutated causes Rett syndrome.