C
Craig Yoshioka
Researcher at Oregon Health & Science University
Publications - 46
Citations - 4899
Craig Yoshioka is an academic researcher from Oregon Health & Science University. The author has contributed to research in topics: Gating & Ion channel. The author has an hindex of 27, co-authored 45 publications receiving 3954 citations. Previous affiliations of Craig Yoshioka include University of Florida & Scripps Research Institute.
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Journal ArticleDOI
Appion: an integrated, database-driven pipeline to facilitate EM image processing.
Gabriel C. Lander,Scott M. Stagg,Neil R. Voss,Anchi Cheng,Denis Fellmann,James Pulokas,Craig Yoshioka,Christopher Irving,Anke M. Mulder,Pick-Wei Lau,Dmitry Lyumkis,Clinton S. Potter,Bridget Carragher +12 more
TL;DR: The vision for this technique is to provide a straightforward manner in which users can proceed from raw data to a reliable 3D reconstruction through a pipeline that both facilitates management of the processing steps and makes the results at each step more transparent.
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DoG Picker and TiltPicker: software tools to facilitate particle selection in single particle electron microscopy.
TL;DR: This work presents two software tools meant to facilitate particle picking, an early stage in the single-particle processing of unknown macromolecules, and TiltPicker, an interactive graphical interface application designed to streamline the selection of particle pairs from tilted-pair datasets.
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Supramolecular Architecture of Severe Acute Respiratory Syndrome Coronavirus Revealed by Electron Cryomicroscopy
Benjamin W. Neuman,Brian D. Adair,Craig Yoshioka,Joel Quispe,Gretchen Orca,Peter Kuhn,Ronald A. Milligan,Mark Yeager,Michael J. Buchmeier +8 more
TL;DR: A novel methodology of single-particle image analysis was applied to selected virus features to obtain a detailed model of the oligomeric state and spatial relationships among viral structural proteins, providing the first detailed view of coronavirus ultrastructure.
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Fluid biopsy in patients with metastatic prostate, pancreatic and breast cancers
Dena Marrinucci,Dena Marrinucci,Kelly Bethel,Anand Kolatkar,Madelyn Luttgen,Michael Malchiodi,Michael Malchiodi,Franziska Baehring,Katharina Voigt,Daniel C. Lazar,Jorge Nieva,Lyudmila Bazhenova,Andrew H. Ko,W. Michael Korn,Ethan Schram,Michael Coward,Xing Yang,Thomas J. Metzner,Rachelle Lamy,Meghana Honnatti,Craig Yoshioka,Joshua Kunken,Yelena Petrova,Devin Sok,David M. Nelson,David M. Nelson,Peter Kuhn +26 more
TL;DR: This initial validation of an enrichment-free assay demonstrates the ability to identify significant numbers of HD-CTCs in a majority of patients with prostate, breast and pancreatic cancers.
Journal ArticleDOI
Visualizing Ribosome Biogenesis: Parallel Assembly Pathways for the 30S Subunit
Anke M. Mulder,Craig Yoshioka,Andrea H. Beck,Anne E. Bunner,Ronald A. Milligan,Clinton S. Potter,Bridget Carragher,James R. Williamson +7 more
TL;DR: DSP results were integrated with mass spectrometry data to construct the first ribosome-assembly mechanism that incorporates binding dependencies, rate constants, and structural characterization of populated intermediates.