D
Damion M. Dooley
Researcher at University of British Columbia
Publications - 33
Citations - 1994
Damion M. Dooley is an academic researcher from University of British Columbia. The author has contributed to research in topics: Ontology (information science) & Computer science. The author has an hindex of 6, co-authored 21 publications receiving 724 citations. Previous affiliations of Damion M. Dooley include Simon Fraser University.
Papers
More filters
Journal ArticleDOI
CARD 2020: antibiotic resistome surveillance with the comprehensive antibiotic resistance database
Brian Alcock,Amogelang R. Raphenya,Tammy T. Y. Lau,Kara K. Tsang,Mégane Bouchard,Arman Edalatmand,William Huynh,Anna-Lisa V. Nguyen,Annie A. Cheng,Sihan Liu,Sally Y. Min,Anatoly Miroshnichenko,Hiu-Ki R Tran,Rafik El Werfalli,Jalees A. Nasir,Martins Oloni,David Speicher,Alexandra Florescu,Bhavya Singh,Mateusz Faltyn,Anastasia Hernández-Koutoucheva,Arjun N. Sharma,Emily Bordeleau,Andrew C. Pawlowski,Haley L. Zubyk,Damion M. Dooley,Emma Griffiths,Finlay Maguire,Geoffrey L. Winsor,Robert G. Beiko,Fiona S. L. Brinkman,William W. L. Hsiao,William W. L. Hsiao,Gary Van Domselaar,Gary Van Domselaar,Andrew G. McArthur +35 more
TL;DR: A new Resistomes & Variants module provides analysis and statistical summary of in silico predicted resistance variants from 82 pathogens and over 100 000 genomes, able to summarize predicted resistance using the information included in CARD, identify trends in AMR mobility and determine previously undescribed and novel resistance variants.
Journal ArticleDOI
FoodOn: a harmonized food ontology to increase global food traceability, quality control and data integration.
Damion M. Dooley,Emma Griffiths,Emma Griffiths,Gurinder Gosal,Pier Luigi Buttigieg,Robert Hoehndorf,Matthew Lange,Lynn M. Schriml,Fiona S. L. Brinkman,William W. L. Hsiao,William W. L. Hsiao +10 more
TL;DR: A group of international scientists give a detailed description of FoodOn, a-consortium-driven project to build a comprehensive food ontology that covers vocabulary from farm to fork, and addresses current gaps in food terminology and focuses on human and domesticated animal food description.
Journal ArticleDOI
Context Is Everything: Harmonization of Critical Food Microbiology Descriptors and Metadata for Improved Food Safety and Surveillance.
Emma Griffiths,Damion M. Dooley,Morag R. Graham,Morag R. Graham,Gary Van Domselaar,Gary Van Domselaar,Fiona S. L. Brinkman,William W. L. Hsiao +7 more
TL;DR: Research efforts include the development of a Genomic Epidemiology Ontology, and Food Ontology that harmonize important laboratory, clinical and epidemiological data fields, as well as existing food resources that provide contextual information with the auditability required for food safety laboratory accreditation.
Posted ContentDOI
OBO Foundry in 2021: operationalizing open data principles to evaluate ontologies.
Rebecca C. Jackson,Nicolas Matentzoglu,James A. Overton,Randi Vita,James P. Balhoff,Pier Luigi Buttigieg,Seth Carbon,Mélanie Courtot,Alexander D. Diehl,Damion M. Dooley,William D. Duncan,Nomi L. Harris,Melissa A. Haendel,Suzanna E. Lewis,Darren A. Natale,David Osumi-Sutherland,Alan Ruttenberg,Lynn M. Schriml,Barry Smith,Christian J. Stoeckert,Nicole Vasilevsky,Ramona Walls,Jie Zheng,Christopher J. Mungall,Bjoern Peters +24 more
TL;DR: The Open Biological and Biomedical Ontologies (OBO) Foundry as discussed by the authors was created to facilitate the development, harmonization, application and sharing of ontologies, guided by a set of overarching principles.
Journal ArticleDOI
CARD 2023: expanded curation, support for machine learning, and resistome prediction at the Comprehensive Antibiotic Resistance Database
Brian Alcock,William Huynh,Romeo Chalil,Keaton W Smith,Amogelang R. Raphenya,Mateusz A Wlodarski,Arman Edalatmand,Aaron Petkau,Sohaib A Syed,Kara K. Tsang,Sheridan J C Baker,Mugdha Dave,Madeline C. McCarthy,Karyn M Mukiri,Jalees A. Nasir,Bahar Golbon,Hamna Imtiaz,Xingjian Jiang,Komal Kaur,Megan Kwong,Zi Cheng Liang,Keyu C Niu,Prabakar Shan,Jasmine Y J Yang,Kristen L Gray,Gemma Hoad,Baoguo Jia,Timsy Bhando,Lindsey A. Carfrae,Maya A. Farha,Shawn French,Rodion Gordzevich,Kenneth Rachwalski,Megan M Tu,Emily Bordeleau,Damion M. Dooley,Emma Griffiths,Haley L. Zubyk,Eric D. Brown,Finlay Maguire,Robert G. Beiko,William C. Hsiao,Fiona S. L. Brinkman,Gary Van Domselaar,Andrew G. McArthur +44 more
TL;DR: