Global production of farmed fish and shellfish has more than doubled in the past 15 years. Many people believe that such growth relieves pressure on ocean fisheries, but the opposite is true for some types of aquaculture. Farming carnivorous species requires large inputs of wild fish for feed. Some aquaculture systems also reduce wild fish supplies through habitat modification, wild seedstock collection and other ecological impacts. On balance, global aquaculture production still adds to world fish supplies; however, if the growing aquaculture industry is to sustain its contribution to world fish supplies, it must reduce wild fish inputs in feed and adopt more ecologically sound management practices.

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Effect of aquaculture on world fish supplies

The environmental fate of phthalate esters: A literature review

(2002). The Effects of Harmful Algal Blooms on Aquatic Organisms. Reviews in Fisheries Science: Vol. 10, No. 2, pp. 113-390.

The Effects of Harmful Algal Blooms on Aquatic Organisms

Vibrios are ubiquitous and abundant in the aquatic environment. A high abundance of vibrios is also detected in tissues and/or organs of various marine algae and animals, e.g., abalones, bivalves, corals, fish, shrimp, sponges, squid, and zooplankton. Vibrios harbour a wealth of diverse genomes as revealed by different genomic techniques including amplified fragment length polymorphism, multilocus sequence typing, repetetive extragenic palindrome PCR, ribotyping, and whole-genome sequencing. The 74 species of this group are distributed among four different families, i.e., Enterovibrionaceae, Photobacteriaceae, Salinivibrionaceae, and Vibrionaceae. Two new genera, i.e., Enterovibrio norvegicus and Grimontia hollisae, and 20 novel species, i.e., Enterovibrio coralii, Photobacterium eurosenbergii, V. brasiliensis, V. chagasii, V. coralliillyticus, V. crassostreae, V. fortis, V. gallicus, V. hepatarius, V. hispanicus, V. kanaloaei, V. neonatus, V. neptunius, V. pomeroyi, V. pacinii, V. rotiferianus, V. superstes, V. tasmaniensis, V. ezurae, and V. xuii, have been described in the last few years. Comparative genome analyses have already revealed a variety of genomic events, including mutations, chromosomal rearrangements, loss of genes by decay or deletion, and gene acquisitions through duplication or horizontal transfer (e.g., in the acquisition of bacteriophages, pathogenicity islands, and super-integrons), that are probably important driving forces in the evolution and speciation of vibrios. Whole-genome sequencing and comparative genomics through the application of, e.g., microarrays will facilitate the investigation of the gene repertoire at the species level. Based on such new genomic information, the taxonomy and the species concept for vibrios will be reviewed in the next years.

Biodiversity of Vibrios

Preface. Selected Atomic Weights. Customary Metric Conversion Factors. 1. Water Quality and Aquaculture: Preliminary Considerations. 2. Ecology of Aquaculture Ponds. 3. Water Quality Requirements. 4. Water Use. 5. Liming. 6. Fertilization. 7. Aeration. 8. Water Circulation. 9. Turbidity and Appearance of Water. 10. Aquatic Weed Control. 11. Off-Flavors and Harmful Algae. 12. Pollution. 13. Chemical, Physical, and Biological Treatments. 14. Waste Management. 15. Measurement of Water Quality. 16. Sustainability and Environmental Issues. References. Index.

Pond aquaculture water quality management

Taura syndrome (TS) was hypothesized to be caused by a virus and proven experimentally by meeting the criteria of Rivers' postulates. This was accomplished through 3 serial infectivity studies utilizing specific-pathogen-free Penaeus vannamei as the host for the TS virus (TSV). Test animals were infected via intramuscular injection with either a crude or cell-free suspension of the virus. The source of the crude homogenate was TSV-infected Ecuadorian P. vannarnel, which were collected during August 1993. Both types of viral inocula caused cumulative mortalities of 73 to 87'.';, among treatment groups. Diagnosis of TS was based on histological analysis of moribund shrimp collected during each experiment. All moribund shrimp, collected between 1 to 3 d post-injection, demonstrated moderate to severe pathognomonic TS les~ons. Both gross external and histological lesions, characteristic of chronic phase TS, were observed In 25 to 100"t, of all survivors. Virions with a buoyant density of approximately 1.337 g m1 ', lcosahedral morphology, and a diameter of 31 to 32 nm, characteristics which suggest that TSV is a member of either the Picornaviridae or Nodaviridae, were recovered from the dead shrimp collected during each of the 3 infectivity studies. Comparisons of TSV samples isolated from naturally infected P. vannamei from Hawaii (USA) and Ecuador indicate that the same virus was responsible for the TS epizootics in both of these shrimp growing regions.

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Taura syndrome in Penaeus vannamei : demonstration of a viral etiology

The causative agent of myonecrosis affecting cultured Penaeus vannamei in Brazil was demonstrated to be a virus after purification of the agent from infected shrimp tissues. Purified viral particles were injected into specific pathogen-free P. vannamei, resulting in a disease that displayed the same characteristics as those found in the original shrimp used for purification. The virus was named infectious myonecrosis virus (IMNV). The viral particles were icosahedral in shape and 40 nm in diameter, with a buoyant density of 1(.)366 g ml(-1) in caesium chloride. The genome consisted of a single, double-stranded (dsRNA) molecule of 7560 bp. Sequencing of the viral genome revealed two non-overlapping open reading frames (ORFs). The 5' ORF (ORF 1, nt 136-4953) encoded a putative RNA-binding protein and a capsid protein. The coding region of the RNA-binding protein was located in the first half of ORF 1 and contained a dsRNA-binding motif in the first 60 aa. The second half of ORF 1 encoded a capsid protein, as determined by amino acid sequencing, with a molecular mass of 106 kDa. The 3' ORF (ORF 2, nt 5241-7451) encoded a putative RNA-dependent RNA polymerase (RdRp) with motifs characteristic of totiviruses. Phylogenetic analysis based on the RdRp clustered IMNV with Giardia lamblia virus, a member of the family Totiviridae. Based on these findings, IMNV may be unique member of the Totiviridae or may represent a new dsRNA virus family that infects invertebrate hosts.

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Purification and characterization of infectious myonecrosis virus of penaeid shrimp.

During mortality outbreaks in hatchery-reared Macrobrachium rosenbergii postlarvae (PL) in Guadeloupe Island (French West Inbes) during 1997, an associated viral disease was discovered and the agent was subsequently isolated. The clinical signs presented by severely affected PL consisted essentially of an opaque whitish appearance of the abdomen. Histopathological changes in affected PL were characterized predominantly by pale to darkly basophilic, often reticulated, cytoplasmic inclusions in the connective tissue cells of most organs and tissues. The isolated virus was approximately 30 nm in diameter as observed with an electron microscope by negative staining. By its location, structure and size it could be related to different families of the small RNA cytoplasmic viruses such as the Picornaviridae or the Nodaviridae. Its characterization is in progress.

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A viral disease associated with mortalities in hatchery-reared postlarvae of the giant freshwater prawn Macrobrachium rosenbergii

Postlarval and juvenile stages of four species of western hemisphere penaeid shrimp (Penaeus aztecus, P. duorarum, P. setiferus, and P. vannamei) were experimentally challenged with white spot syndrome virus (WSSV) and yellow head virus (YHV) isolates originating from Asia. Challenge exposures were accomplished by feeding minced tissue from WSSV- or YHV-infected shrimp tissues. The WSSV challenge of postlarval shrimp resulted in severe infections in P. setiferus and P. vannamei and less severe infections in P. aztecus and P. duorarum. The WSSV challenge of juvenile shrimp (∼1 g) resulted in severe infections and 100% cumulative mortality in P. setiferus and P. vannamei, moderate infections and 27% cumulative mortality in P. aztecus, and no signs of infection and 0% cumulative mortality in P. duorarum. The YHV challenge caused serious disease and mortality in juveniles of all four species, but postlarval shrimp appeared resistant to YHV because no virus-related signs of infection, mortality, or di...

Experimental Infection of Western Hemisphere Penaeid Shrimp with Asian White Spot Syndrome Virus and Asian Yellow Head Virus

Biosecurity, as it is being applied to shrimp aquaculture, may be defined as the practice of exclusion of specific pathogens from cultured aquatic stocks in brood stock facilities, hatcheries, and farms, or from entire regions or countries for the purpose of disease prevention. To make a biosecurity program a functional concept in shrimp aquaculture, the relevant risks should be identified and the appropriate biosecurity measures put into practice to mitigate those risks. Examples of biosecurity measures put into place for this purpose may include such basics as site selection when the intent is to locate a new shrimp culture facility in an area where certain diseases are not enzootic. Standard facilitylfarm operating procedures can be adapted to minimize the risks of disease introduction and spread within a facility through such concepts as pretreatment of all source water, and reduced or “zero” water exchange. Stocking shrimp culture facilities with domesticated shrimp stocks that are free of specific diseases (“Specific Pathogen Free” or SPF) and or with stocks resistant to specific disease agents (SPR) is perhaps the most important single component of a biosecurity program. The example set by the development of domesticated SPF stocks of Litopenaeus vannamei has helped to make biosecure shrimp culture feasible. The development of these and other SPF stocks, and the diagnostic methods to develop and monitor them for specific diseases and disease causing agents, have been milestones in the development of the international shrimp farming industry in recent years, and it has contributed to the species rivaliig Penaeus monodon as the dominant farmed shrimp species. The regular monitoring (surveillance) of shrimp stocks in biosecure culture facilities is a necessary component of a biosecurity plan, as is having in place a contingency plan for disease containment and eradication should a breach occur in the physical and managerial components of a biosecure facility and a targeted disease occur.

Donald V. Lightner

Papers

Taura syndrome in Penaeus vannamei : demonstration of a viral etiology

Purification and characterization of infectious myonecrosis virus of penaeid shrimp.

A viral disease associated with mortalities in hatchery-reared postlarvae of the giant freshwater prawn Macrobrachium rosenbergii

Experimental Infection of Western Hemisphere Penaeid Shrimp with Asian White Spot Syndrome Virus and Asian Yellow Head Virus

Biosecurity in Shrimp Farming: Pathogen Exclusion through Use of SPF Stock and Routine Surveillance