D
Douglas M. Ruden
Researcher at Wayne State University
Publications - 100
Citations - 14097
Douglas M. Ruden is an academic researcher from Wayne State University. The author has contributed to research in topics: Epigenetics & DNA methylation. The author has an hindex of 35, co-authored 89 publications receiving 11165 citations. Previous affiliations of Douglas M. Ruden include University of Alabama at Birmingham & University of Alabama.
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Journal ArticleDOI
A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff: SNPs in the genome of Drosophila melanogaster strain w1118; iso-2; iso-3
Pablo Cingolani,Adrian E. Platts,Le Lily Wang,M. Coon,Tung T. Nguyen,Luan Wang,Susan Land,Xiangyi Lu,Douglas M. Ruden +8 more
TL;DR: It appears that the 5′ and 3′ UTRs are reservoirs for genetic variations that changes the termini of proteins during evolution of the Drosophila genus.
Journal ArticleDOI
Using Drosophila melanogaster as a Model for Genotoxic Chemical Mutational Studies with a New Program, SnpSift
Pablo Cingolani,Viral M. Patel,M. Coon,Tung T. Nguyen,Susan Land,Douglas M. Ruden,Xiangyi Lu +6 more
TL;DR: It is demonstrated that combining SnpEff and SnpSift can expedite the identification of candidate phenotype-causative mutations in chemically mutagenized Drosophila strains and can also be used to characterize the variety of mutations generated by genotoxic chemicals.
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Ten Putative Contributors to the Obesity Epidemic
Emily J. McAllister,Nikhil V. Dhurandhar,Scott W. Keith,Louis J. Aronne,Jamie L. Barger,Monica L. Baskin,Ruth M. Benca,Joseph R. Biggio,Mary M. Boggiano,J C Eisenmann,Mai A. Elobeid,Kevin R. Fontaine,Peter D. Gluckman,Erin C. Hanlon,Peter T. Katzmarzyk,Angelo Pietrobelli,David T. Redden,Douglas M. Ruden,Chenxi Wang,Robert A. Waterland,Suzanne M. Wright,David B. Allison +21 more
TL;DR: Evidence for microorganisms, epigenetics, increasing maternal age, greater fecundity among people with higher adiposity, assortative mating, sleep debt, endocrine disruptors, pharmaceutical iatrogenesis, reduction in variability of ambient temperatures, and intrauterine and intergenerational effects as contributing factors to the obesity epidemic are reviewed.
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Putative contributors to the secular increase in obesity: exploring the roads less traveled
Scott W. Keith,David T. Redden,Peter T. Katzmarzyk,Mary M. Boggiano,Erin C. Hanlon,Ruth M. Benca,Douglas M. Ruden,Angelo Pietrobelli,Jamie L. Barger,Kevin R. Fontaine,Chenxi Wang,Louis J. Aronne,Suzanne M. Wright,Monica L. Baskin,Nikhil V. Dhurandhar,M C Lijoi,Carlos M. Grilo,M DeLuca,Andrew O. Westfall,David B. Allison +19 more
TL;DR: Investigation of plausible contributors to the obesity epidemic beyond the two most commonly suggested factors, reduced physical activity and food marketing practices found supportive evidence that in many cases is as compelling as the evidence for more commonly discussed putative explanations.
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Evidence for an Epigenetic Mechanism by which Hsp90 Acts as a Capacitor for Morphological Evolution
TL;DR: Hsp90 acts as a capacitor for morphological evolution through epigenetic and genetic mechanisms, whereby reduced activity of Hsp90 induces a heritably altered chromatin state.