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Dubravka Pezic
Researcher at University College London
Publications - 15
Citations - 2139
Dubravka Pezic is an academic researcher from University College London. The author has contributed to research in topics: Piwi-interacting RNA & Cohesin. The author has an hindex of 10, co-authored 14 publications receiving 1785 citations. Previous affiliations of Dubravka Pezic include California Institute of Technology.
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Journal ArticleDOI
PIWI-interacting small RNAs: the vanguard of genome defence.
TL;DR: Owing to their limited expression in gonads and their sequence diversity, piRNAs have been the most mysterious class of small non-coding RNAs regulating RNA silencing, but much progress is being made into the understanding of their biogenesis and molecular functions, including the specific subcellular compartmentalization of the piRNA pathway in granular cytoplasmic bodies.
Journal ArticleDOI
Integrative detection and analysis of structural variation in cancer genomes
Jesse R. Dixon,Jie Xu,Vishnu Dileep,Ye Zhan,Fan Song,Victoria T. Le,Galip Gürkan Yardımcı,Abhijit Chakraborty,Darrin V. Bann,Yanli Wang,Royden A. Clark,Lijun Zhang,Hongbo Yang,Tingting Liu,Sriranga Iyyanki,Lin An,Christopher Pool,Takayo Sasaki,Juan Carlos Rivera-Mulia,Hakan Ozadam,Bryan R. Lajoie,Rajinder Kaul,Michael Buckley,Kristen Lee,Morgan Diegel,Dubravka Pezic,Christina Ernst,Suzana Hadjur,Duncan T. Odom,Duncan T. Odom,John A. Stamatoyannopoulos,James R. Broach,Ross C. Hardison,Ferhat Ay,Ferhat Ay,William Stafford Noble,Job Dekker,Job Dekker,David M. Gilbert,Feng Yue +39 more
TL;DR: An integrative framework for identifying structural variants (SVs) in cancer that applies optical mapping, Hi-C, and whole-genome sequencing is presented and finds SVs affecting distal regulatory sequences, DNA replication, and three-dimensional chromatin structure.
Journal ArticleDOI
piRNA pathway targets active LINE1 elements to establish the repressive H3K9me3 mark in germ cells
TL;DR: It is shown that in addition to DNA methylation, the piRNA pathway is required to maintain a high level of the repressive H3K9me3 histone modification on long interspersed nuclear elements (LINEs) in germ cells.
Book ChapterDOI
The piRNA Pathway Guards the Germline Genome Against Transposable Elements.
TL;DR: This Chapter gives an overview of current knowledge on piRNA biogenesis, and mechanistic details of both transcriptional and posttranscriptional TE silencing by the piRNA pathway, and the importance of post-translational modifications and subcellular localization of the pi RNA machinery.
Journal ArticleDOI
MORC1 represses transposable elements in the mouse male germline
William A. Pastor,Hume Stroud,Hume Stroud,Kevin Nee,Wanlu Liu,Dubravka Pezic,Sergei A. Manakov,Serena A. Lee,Guillaume Moissiard,Natasha Zamudio,Déborah Bourc'his,Alexei A. Aravin,Amander T. Clark,Steven E. Jacobsen +13 more
TL;DR: This article showed that MORC1 mutants show highly localized defects in the establishment of DNA methylation at specific classes of transposons, and this is associated with failed transposon silencing at these sites.