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Egils Stalidzans
Researcher at University of Latvia
Publications - 54
Citations - 1548
Egils Stalidzans is an academic researcher from University of Latvia. The author has contributed to research in topics: Honey bee & Metabolic engineering. The author has an hindex of 15, co-authored 48 publications receiving 1061 citations. Previous affiliations of Egils Stalidzans include Latvian Biomedical Research and Study centre & Latvia University of Agriculture.
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Journal ArticleDOI
Creation and analysis of biochemical constraint-based models using the COBRA Toolbox v.3.0
Laurent Heirendt,Sylvain Arreckx,Thomas Pfau,Sebastián N. Mendoza,Anne Richelle,Almut Heinken,Hulda S. Haraldsdóttir,Jacek Wachowiak,Sarah M. Keating,Vanja Vlasov,Stefania Magnusdottir,Chiam Yu Ng,German Preciat,Alise Žagare,Siu Hung Joshua Chan,Maike K. Aurich,Catherine M. Clancy,Jennifer Modamio,John T. Sauls,Alberto Noronha,Aarash Bordbar,Benjamin Cousins,Diana C. El Assal,Luis Vitores Valcárcel,Iñigo Apaolaza,Susan Ghaderi,Masoud Ahookhosh,Marouen Ben Guebila,Andrejs Kostromins,Nicolas Sompairac,Hoai M. Le,Ding Ma,Yuekai Sun,Lin Wang,James T. Yurkovich,Miguel A.P. Oliveira,Phan Tu Vuong,Lemmer P. El Assal,Inna Kuperstein,Andrei Zinovyev,H. Scott Hinton,William A. Bryant,Francisco J. Aragón Artacho,Francisco J. Planes,Egils Stalidzans,Alejandro Maass,Santosh Vempala,Michael Hucka,Michael A. Saunders,Costas D. Maranas,Nathan E. Lewis,Thomas Sauter,Bernhard O. Palsson,Bernhard O. Palsson,Ines Thiele,Ronan M. T. Fleming,Ronan M. T. Fleming +56 more
TL;DR: This protocol provides an overview of all new features of the COBRA Toolbox and can be adapted to generate and analyze constraint-based models in a wide variety of scenarios.
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Creation and analysis of biochemical constraint-based models: the COBRA Toolbox v3.0.
Laurent Heirendt,Sylvain Arreckx,Thomas Pfau,Sebastián N. Mendoza,Anne Richelle,Almut Heinken,Hulda S. Haraldsdóttir,Jacek Wachowiak,Sarah M. Keating,Vanja Vlasov,Stefania Magnusdottir,Chiam Yu Ng,German Preciat,Alise Žagare,Siu Hung Joshua Chan,Maike K. Aurich,Catherine M. Clancy,Jennifer Modamio,John T. Sauls,Alberto Noronha,Aarash Bordbar,Benjamin Cousins,Diana C. El Assal,Luis Vitores Valcárcel,Iñigo Apaolaza,Susan Ghaderi,Masoud Ahookhosh,Marouen Ben Guebila,Andrejs Kostromins,Nicolas Sompairac,Hoai M. Le,Ding Ma,Yuekai Sun,Lin Wang,James T. Yurkovich,Miguel A.P. Oliveira,Phan Tu Vuong,Lemmer P. El Assal,Inna Kuperstein,Andrei Zinovyev,H. Scott Hinton,William A. Bryant,Francisco J. Aragón Artacho,Francisco J. Planes,Egils Stalidzans,Alejandro Maass,Santosh Vempala,Michael Hucka,Michael A. Saunders,Costas D. Maranas,Nathan E. Lewis,Thomas Sauter,Bernhard O. Palsson,Ines Thiele,Ronan M. T. Fleming +54 more
TL;DR: This protocol can be adapted for the generation and analysis of a constraint-based model in a wide variety of molecular systems biology scenarios and is an update to the COBRA Toolbox 1.0 and 2.0.
Journal ArticleDOI
Challenges in the development of Precision Beekeeping
TL;DR: In this article, the development of decision support systems, which is usually a stumbling block in Precision Agriculture, is suggested to be a mid-term task, and specific classes of actors are proposed to operate within future Precision Beekeeping (PB) systems for the automatic execution of suggestions made by decision support system, as well as for diagnostic purposes.
Journal ArticleDOI
Biotechnological potential of respiring Zymomonas mobilis: a stoichiometric analysis of its central metabolism
Agris Pentjuss,Ilona Odzina,Andrejs Kostromins,David A. Fell,Egils Stalidzans,Uldis Kalnenieks +5 more
TL;DR: The stoichiometric analysis presented here suggests the feasibility of several metabolic engineering strategies for obtaining high-value products that would use the electron transport chain to oxidize the excess NAD(P)H, generated during synthesis of these metabolites.
Journal ArticleDOI
Paint4Net: COBRA Toolbox extension for visualization of stoichiometric models of metabolism
TL;DR: The Paint4Net is a novel COBRA Toolbox extension for automatic generation of a hypergraph layout of defined scope with the steady state rates of reaction fluxes of stoichiometric models.