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Fu Shujin
Publications - 7
Citations - 347
Fu Shujin is an academic researcher. The author has contributed to research in topics: Illumina dye sequencing & Nuclear DNA. The author has an hindex of 4, co-authored 7 publications receiving 313 citations.
Papers
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Journal ArticleDOI
Comparative performance of the BGISEQ-500 vs Illumina HiSeq2500 sequencing platforms for palaeogenomic sequencing
Sarah Siu Tze Mak Mak,Shyam Gopalakrishnan,Christian Carøe,Christian Carøe,Chunyu Geng,Shanlin Liu,Mikkel-Holger S. Sinding,Mikkel-Holger S. Sinding,Mikkel-Holger S. Sinding,Lukas F. K. Kuderna,Wenwei Zhang,Fu Shujin,Filipe G. Vieira,Mietje Germonpré,Hervé Bocherens,Sergey Fedorov,Bent O. Petersen,Thomas Sicheritz-Pontén,Tomas Marques-Bonet,Tomas Marques-Bonet,Guojie Zhang,Hui Jiang,M. Thomas P. Gilbert,M. Thomas P. Gilbert,M. Thomas P. Gilbert +24 more
TL;DR: The observations suggest that the BGISEQ-500 holds the potential to represent a valid and potentially valuable alternative platform for palaeogenomic data generation that is worthy of future exploration by those interested in the sequencing and analysis of degraded DNA.
Journal ArticleDOI
Germline and somatic variant identification using BGISEQ-500 and HiSeq X Ten whole genome sequencing.
Ann-Marie Patch,Katia Nones,Stephen H. Kazakoff,Felicity Newell,Scott Wood,Conrad Leonard,Oliver Holmes,Qinying Xu,Venkateswar Addala,Jenette Creaney,Jenette Creaney,Bruce W. S. Robinson,Bruce W. S. Robinson,Fu Shujin,Chunyu Geng,Tong Li,Wenwei Zhang,Xinming Liang,Junhua Rao,Jiahao Wang,Mingyu Tian,Yonggang Zhao,Fei Teng,Honglan Gou,Bicheng Yang,Hui Jiang,Feng Mu,John V. Pearson,Nicola Waddell +28 more
TL;DR: The results indicate the potential applicability of the BGISEQ-500 platform for the identification of somatic and germline single nucleotide variants by whole genome sequencing, and represent the first publicly-available cancer genome sequencing performed using this platform.
Patent
Sequencing library building method and reagent based on molecular inverse probe
Geng Chunyu,Yu Yuan,Li Meiyan,Guo Jing,Hui Jiang,Wenwei Zhang,Guo Rongrong,Fu Shujin,Tian Kai,An Dan,Lingyu He +10 more
TL;DR: In this article, a sequencing library building method and reagent based on a molecular inverse probe was proposed, which includes using denatured nucleic acid to perform annealing hybridization, where the inverse probe comprises the anchoring sequence of a 5' end, the extension sequence of 3' end and the sequencing connector sequence between the anchor and the extension sequences, and the anchors and extensions are respectively inversely complementary with sequences at two ends of a target area.
Patent
Linker element and method of using same to construct sequencing library
Yuan Jiang,Geng Chunyu,Xia Zhao,Fu Shujin,Lingyu He,Li Yaqiao,Su Xiaoshan,Wu Fanzi,Wenwei Zhang,Hui Jiang,Andrei Alexeev,Radoje Drmanac +11 more
TL;DR: In this article, a linker element and a method to construct a sequencing library is presented, where the linker elements are used to solve the problem of fragment interlinking, linker self-linking and low linking efficiency, and reduce the purification reaction between steps.
Patent
Library construction method for invasive antenatal testing and kit
Zhang Yanyan,Yuan Jiang,Qiaoling Li,Hanmin Wei,Xia Zhao,Chao Dong,Hanjie Shen,Tian Kai,Yu Jing,Fu Shujin,Su Xiaoshan,Geng Chunyu +11 more
TL;DR: In this article, a library construction method for invasive antenatal testing and a kit is presented, which includes steps of performing tail end repairing and A adding on segmental DNA by using polymerase, polynucleotide kinase and polymerase without 3'-5' excision activity in the same reaction system in the presence of dNTP and additional dATP; then performing joint adding and purification, PCR and looping.