G
Gwendolyn E. Kaeser
Researcher at Discovery Institute
Publications - 19
Citations - 2313
Gwendolyn E. Kaeser is an academic researcher from Discovery Institute. The author has contributed to research in topics: Amyloid precursor protein & Genetic recombination. The author has an hindex of 10, co-authored 18 publications receiving 1713 citations. Previous affiliations of Gwendolyn E. Kaeser include University of Amsterdam & University of California, San Diego.
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Journal ArticleDOI
Neuronal subtypes and diversity revealed by single-nucleus RNA sequencing of the human brain.
Blue B. Lake,Rizi Ai,Gwendolyn E. Kaeser,Gwendolyn E. Kaeser,Neeraj Salathia,Yun C. Yung,Rui Liu,Andre Wildberg,Derek Gao,Ho-Lim Fung,Song Chen,Raakhee Vijayaraghavan,Julian Wong,Allison Chen,Xiaoyan Sheng,Fiona Kaper,Richard Shen,Mostafa Ronaghi,Jian-Bing Fan,Wei Wang,Jerold Chun,Kun Zhang +21 more
TL;DR: A scalable approach to sequence and quantify RNA molecules in isolated neuronal nuclei from a postmortem brain, generating 3227 sets of single-neuron data from six distinct regions of the cerebral cortex demonstrates a robust and scalable method for identifying and categorizing single nuclear transcriptomes.
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Integrative single-cell analysis of transcriptional and epigenetic states in the human adult brain.
Blue B. Lake,Song Chen,Brandon C. Sos,Jean Fan,Gwendolyn E. Kaeser,Yun C. Yung,Thu Elizabeth Duong,Derek Gao,Jerold Chun,Peter V. Kharchenko,Kun Zhang +10 more
TL;DR: Improved high-throughput methods for single-nucleus droplet-based sequencing and single-cell transposome hypersensitive site sequencing are reported, which revealed regulatory elements and transcription factors that underlie cell-type distinctions and mapped disease-associated risk variants to specific cellular populations, which provided insights into normal and pathogenic cellular processes in the human brain.
Journal ArticleDOI
Characterizing transcriptional heterogeneity through pathway and gene set overdispersion analysis.
Jean Fan,Neeraj Salathia,Rui Liu,Gwendolyn E. Kaeser,Yun C. Yung,Joseph L Herman,Fiona Kaper,Jian-Bing Fan,Kun Zhang,Jerold Chun,Peter V. Kharchenko +10 more
TL;DR: The authors developed pathway and gene set overdispersion analysis (PAGODA) to resolve multiple, potentially overlapping aspects of transcriptional heterogeneity by testing gene sets for coordinated variability among measured cells.
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Somatic APP gene recombination in Alzheimer’s disease and normal neurons
Ming-Hsiang Lee,Benjamin Siddoway,Gwendolyn E. Kaeser,Gwendolyn E. Kaeser,Igor Segota,Richard Rivera,William J. Romanow,Christine S. Liu,Christine S. Liu,Chris Park,Chris Park,Grace Kennedy,Tao Long,Jerold Chun +13 more
TL;DR: For example, this article described recombination of the Alzheimer's disease-related gene APP in human neurons, occurring mosaically as thousands of variant "genomic cDNAs" (gencDNAs).
Journal ArticleDOI
Genomic mosaicism with increased amyloid precursor protein (APP) gene copy number in single neurons from sporadic Alzheimer's disease brains
Diane M. Bushman,Gwendolyn E. Kaeser,Benjamin Siddoway,Jurgen W Westra,Richard Rivera,Stevens K. Rehen,Yun C. Yung,Jerold Chun +7 more
TL;DR: These data identify somatic genomic changes in single neurons, affecting known and unknown loci, which are increased in sporadic AD, and further indicate functionality for genomic mosaicism in the CNS.