L
Liming Xu
Researcher at Chinese Academy of Sciences
Publications - 24
Citations - 849
Liming Xu is an academic researcher from Chinese Academy of Sciences. The author has contributed to research in topics: Medicine & Biology. The author has an hindex of 10, co-authored 14 publications receiving 700 citations.
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Journal ArticleDOI
Genome of the long-living sacred lotus ( Nelumbo nucifera Gaertn.)
Ray Ming,Ray Ming,Robert VanBuren,Yanling Liu,Mei Yang,Yuepeng Han,Leiting Li,Leiting Li,Qiong Zhang,Qiong Zhang,Min-Jeong Kim,Michael C. Schatz,Michael S. Campbell,Jingping Li,John E. Bowers,Haibao Tang,Eric Lyons,Ann A. Ferguson,Giuseppe Narzisi,David R. Nelson,Crysten E. Blaby-Haas,Andrea R. Gschwend,Yuannian Jiao,Yuannian Jiao,Joshua P. Der,Fanchang Zeng,Jennifer Han,Xiang Jia Min,Karen A. Hudson,Ratnesh Singh,Aleel K. Grennan,Steven J. Karpowicz,Jennifer R. Watling,Kikukatsu Ito,Sharon A. Robinson,Matthew E. Hudson,Qingyi Yu,Todd C. Mockler,Andrew Carroll,Yun Zheng,Ramanjulu Sunkar,Ruizong Jia,Nancy Jung Chen,Jie Arro,Ching Man Wai,Eric K. Wafula,Ashley K. Spence,Yanni Han,Liming Xu,Jisen Zhang,Rhiannon M. Peery,Miranda J. Haus,Wenwei Xiong,James A. Walsh,Jun Wu,Ming Li Wang,Yun J. Zhu,Robert E. Paull,Anne B. Britt,Chunguang Du,Stephen R. Downie,Mary A. Schuler,Todd P. Michael,Steve Long,Donald R. Ort,Donald R. Ort,J. William Schopf,J. William Schopf,David R. Gang,Ning Jiang,Mark Yandell,Claude W. dePamphilis,Sabeeha S. Merchant,Andrew H. Paterson,Bob B. Buchanan,Shaohua Li,Jane Shen-Miller +76 more
TL;DR: In this article, the China Antique variety of the sacred lotus was sequenced with Illumina and 454 technologies, at respective depths of 101× and 5.2×, and the final assembly has a contig N50 of 38.8 kbp and a scaffold n50 of 3.4 Mbp, covering 86.5% of the estimated 929 Mbp total genome size.
Journal ArticleDOI
Nelumbo nucifera [data set]
Ray Ming,Robert VanBuren,Yanling Liu,Mei Yang,Yuepeng Han,Leiting Li,Qiong Zhang,Min-Jeong Kim,Michael C. Schatz,Michael J. Campbell,Jingping Li,John E. Bowers,Haibao Tang,Eric Lyons,Ann A. Ferguson,Giuseppe Narzisi,David R. Nelson,Crysten E. Blaby-Haas,Andrea R. Gschwend,Yuannian Jiao,Joshua P. Der,Fanchang Zeng,Jennifer Han,Jia Min Xiang,Karen A. Hudson,Ratnesh Singh,Aleel K. Grennan,Steven J. Karpowicz,Jennifer R. Watling,Kikukatsu Ito,Sharon A. Robinson,Matthew E. Hudson,Qingyi Yu,Todd C. Mockler,Andrew Carroll,Yun Zheng,Ramanjulu Sunkar,Ruizong Jia,Nancy Jung Chen,Jie Arro,Ching Man Wai,Eric K. Wafula,Ashley K. Spence,Yanni Han,Liming Xu,Jisen Zhang,Rhiannon M. Peery,Miranda J. Haus,Wenwei Xiong,James A. Walsh,Jun Wu,Ming-Li Wang,Yun J. Zhu,Robert E. Paull,Anne B. Britt,Chunguang Du,Stephen R. Downie,Mary A. Schuler,Todd P. Michael,Steve Long,Donald R. Ort,J. William Schopf,David R. Gang,Ning Jiang,Mark Yandell,Claude W. dePamphilis,Sabeeha S. Merchant,Andrew H. Paterson,Bob B. Buchanan,Shaohua Li,Jane Shen-Miller +70 more
Journal ArticleDOI
Transcriptomic Analysis of the Regulation of Rhizome Formation in Temperate and Tropical Lotus ( Nelumbo nucifera )
TL;DR: Comparative transcriptomic analysis detected several differentially expressed genes and potential candidate genes required for rhizome girth enlargement, which lay a foundation for future studies on molecular mechanisms underlyingRhizome formation.
Journal ArticleDOI
Genetic linkage maps for Asian and American lotus constructed using novel SSR markers derived from the genome of sequenced cultivar
TL;DR: The present study reports the first construction of genetic linkage maps for Nelumbo, which can serve as reference linkage maps to accelerate characterization germplasm, genetic mapping for traits of economic interest, and molecular breeding with marker-assisted selection.
Journal ArticleDOI
Digital Gene Expression Analysis Provides Insight into the Transcript Profile of the Genes Involved in Aporphine Alkaloid Biosynthesis in Lotus (Nelumbo nucifera).
TL;DR: Digital gene expression technology was used to identify differentially-expressed genes between two lotus cultivars with different alkaloid contents at four leaf development stages, and predicted potential genes involved in aporphine alkaloids biosynthesis by weighted gene co-expression network analysis (WGCNA).