R
Rama Balakrishnan
Researcher at Stanford University
Publications - 34
Citations - 10912
Rama Balakrishnan is an academic researcher from Stanford University. The author has contributed to research in topics: Genome & Annotation. The author has an hindex of 25, co-authored 33 publications receiving 9774 citations. Previous affiliations of Rama Balakrishnan include California Institute of Technology & Norwegian University of Science and Technology.
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Journal ArticleDOI
The Gene Ontology (GO) database and informatics resource.
Midori A. Harris,Jennifer I. Clark,Ireland A,Jane Lomax,Michael Ashburner,Michael Ashburner,R. Foulger,R. Foulger,Karen Eilbeck,Karen Eilbeck,Suzanna E. Lewis,Suzanna E. Lewis,B. Marshall,B. Marshall,Christopher J. Mungall,Christopher J. Mungall,J. Richter,J. Richter,Gerald M. Rubin,Gerald M. Rubin,Judith A. Blake,Carol J. Bult,Dolan M,Drabkin H,Janan T. Eppig,Hill Dp,L. Ni,Ringwald M,Rama Balakrishnan,Rama Balakrishnan,J. M. Cherry,J. M. Cherry,Karen R. Christie,Karen R. Christie,Maria C. Costanzo,Maria C. Costanzo,Selina S. Dwight,Selina S. Dwight,Stacia R. Engel,Stacia R. Engel,Dianna G. Fisk,Dianna G. Fisk,Jodi E. Hirschman,Jodi E. Hirschman,Eurie L. Hong,Eurie L. Hong,Robert S. Nash,Robert S. Nash,Anand Sethuraman,Anand Sethuraman,Chandra L. Theesfeld,Chandra L. Theesfeld,David Botstein,David Botstein,Kara Dolinski,Kara Dolinski,Becket Feierbach,Becket Feierbach,Tanya Z. Berardini,Tanya Z. Berardini,S. Mundodi,S. Mundodi,Seung Y. Rhee,Seung Y. Rhee,Rolf Apweiler,Daniel Barrell,Camon E,E. Dimmer,Lee,Rex L. Chisholm,Pascale Gaudet,Pascale Gaudet,Warren A. Kibbe,Warren A. Kibbe,Ranjana Kishore,Ranjana Kishore,Erich M. Schwarz,Erich M. Schwarz,Paul W. Sternberg,Paul W. Sternberg,M. Gwinn,Hannick L,Wortman J,Matthew Berriman,Matthew Berriman,Wood,Wood,de la Cruz N,de la Cruz N,Peter J. Tonellato,Peter J. Tonellato,Pankaj Jaiswal,Pankaj Jaiswal,Seigfried T,Seigfried T,White R,White R +96 more
TL;DR: The Gene Ontology (GO) project as discussed by the authors provides structured, controlled vocabularies and classifications that cover several domains of molecular and cellular biology and are freely available for community use in the annotation of genes, gene products and sequences.
Journal ArticleDOI
Saccharomyces Genome Database: the genomics resource of budding yeast
J. Michael Cherry,Eurie L. Hong,Craig Amundsen,Rama Balakrishnan,Gail Binkley,Esther T. Chan,Karen R. Christie,Maria C. Costanzo,Selina S. Dwight,Stacia R. Engel,Dianna G. Fisk,Jodi E. Hirschman,Benjamin C. Hitz,Kalpana Karra,Cynthia J. Krieger,Stuart R. Miyasato,Robert S. Nash,Julie Park,Marek S. Skrzypek,Matt Simison,Shuai Weng,Edith D. Wong +21 more
TL;DR: The Saccharomyces Genome Database is an encyclopedia of the yeast genome, its chromosomal features, their functions and interactions, and public access to these data is provided to researchers and educators via web pages designed for optimal ease of use.
Book ChapterDOI
Saccharomyces Genome Database.
Laurie Issel-Tarver,Karen R. Christie,Kara Dolinski,Rey Andrada,Rama Balakrishnan,Catherine A. Ball,Gail Binkley,Stan Dong,Selina S. Dwight,Dianna G. Fisk,Midori A. Harris,Mark Schroeder,Anand Sethuraman,Kane Tse,Shuai Weng,David Botstein,J. Michael Cherry +16 more
TL;DR: The organization of the Saccharomyces Genome Database, the sources of the data stored in SGD, some methods for retrieving information from the database, connections SGD has with outside databases and non-yeast research communities, and SGD's repository of yeast community information are described.
Journal ArticleDOI
The Gene Ontology project in 2008
Midori A. Harris,Jennifer I. Deegan,Amelia Ireland,Jane Lomax,Michael Ashburner,Susan Tweedie,Seth Carbon,Suzanna E. Lewis,Christopher J. Mungall,John Day Richter,Karen Eilbeck,Judith A. Blake,Carol J. Bult,Alexander D. Diehl,Mary E. Dolan,Harold J. Drabkin,Janan T. Eppig,David P. Hill,Ni Li,Martin Ringwald,Rama Balakrishnan,Gail Binkley,J. Michael Cherry,Karen R. Christie,Maria C. Costanzo,Qing Dong,Stacia R. Engel,Dianna G. Fisk,Jodi E. Hirschman,Benjamin C. Hitz,Eurie L. Hong,Cynthia J. Krieger,Stuart R. Miyasato,Robert S. Nash,Julie Park,Marek S. Skrzypek,Shuai Weng,Edith D. Wong,Kathy K. Zhu,David Botstein,Kara Dolinski,Michael S. Livstone,Rose Oughtred,Tanya Z. Berardini,Li Donghui,Seung Y. Rhee,Rolf Apweiler,Daniel Barrell,Evelyn Camon,Emily Dimmer,Rachael P. Huntley,Nicola Mulder,Varsha K. Khodiyar,Ruth C. Lovering,Sue Povey,Rex L. Chisholm,Petra Fey,Pascale Gaudet,Warren A. Kibbe,Ranjana Kishore,Erich M. Schwarz,Paul W. Sternberg,Kimberly Van Auken,Michelle G. Giglio,Linda Hannick,Jennifer R. Wortman,Martin Aslett,Matthew Berriman,Valerie Wood,Howard J. Jacob,Stan Laulederkind,Victoria Petri,Mary Shimoyama,Jennifer L. Smith,Simon N. Twigger,Pankaj Jaiswal,Trent E. Seigfried,Doug Howe,Monte Westerfield,Candace Collmer,Trudy Torto Alalibo,Erika Feltrin,Giorgio Valle,Susan Bromberg,Shane C. Burgess,Fiona M. McCarthy +85 more
TL;DR: The GO Consortium has launched a focused effort to provide comprehensive and detailed annotation of orthologous genes across a number of ‘reference’ genomes, including human and several key model organisms.
Gene Ontology Consortium. The Gene Ontology (GO) database and informatics resource
Harris Ma,Jennifer I. Clark,Amelia Ireland,Jane Lomax,Michael Ashburner,R. Foulger,Karen Eilbeck,Suzanna E. Lewis,B. Marshall,Christopher J. Mungall,J. Richter,Gerald M. Rubin,Blake Ja,Carol J. Bult,Mary E. Dolan,H. Drabkin,Janan T. Eppig,David P. Hill,L. Ni,Martin Ringwald,Rama Balakrishnan,J. M. Cherry,Karen R. Christie,Maria C. Costanzo,Selina S. Dwight,Stacia R. Engel,Dianna G. Fisk,Jodi E. Hirschman,Eurie L. Hong,Robert S. Nash,Anand Sethuraman,Chandra L. Theesfeld,David Botstein,Kara Dolinski,Becket Feierbach,Tanya Z. Berardini,S. Mundodi,Seung Y. Rhee,Rolf Apweiler,Daniel Barrell,Evelyn Camon,E. Dimmer,V. Lee,Rex L. Chisholm,Pascale Gaudet,Warren A. Kibbe,Ranjana Kishore,Erich M. Schwarz,Paul W. Sternberg,M. Gwinn,Linda Hannick,Jennifer R. Wortman,Matthew Berriman,Valerie Wood,N. de sur la Cruz,Peter J. Tonellato,Pankaj Jaiswal,Trent E. Seigfried,Ra White +58 more
TL;DR: The Gene Ontology (GO) project provides structured, controlled vocabularies and classifications that cover several domains of molecular and cellular biology and are freely available for community use in the annotation of genes, gene products and sequences.