R
Ronald C. Taylor
Researcher at Pacific Northwest National Laboratory
Publications - 66
Citations - 7299
Ronald C. Taylor is an academic researcher from Pacific Northwest National Laboratory. The author has contributed to research in topics: Biological network inference & Gene. The author has an hindex of 24, co-authored 65 publications receiving 6847 citations. Previous affiliations of Ronald C. Taylor include United States Department of Energy & Vanderbilt University.
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Minimum information about a microarray experiment (MIAME)-toward standards for microarray data.
Alvis Brazma,Pascal Hingamp,John Quackenbush,Gavin Sherlock,Paul T. Spellman,Chris Stoeckert,John Aach,Wilhelm Ansorge,Catherine A. Ball,Helen C. Causton,Terry Gaasterland,Patrick Glenisson,Frank C. P. Holstege,Irene F. Kim,Victor Markowitz,John C. Matese,Helen Parkinson,Alan J. Robinson,Ugis Sarkans,Steffen Schulze-Kremer,Jason E. Stewart,Ronald C. Taylor,Jaak Vilo,Martin Vingron +23 more
TL;DR: The ultimate goal of this work is to establish a standard for recording and reporting microarray-based gene expression data, which will in turn facilitate the establishment of databases and public repositories and enable the development of data analysis tools.
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Genomic Expansion of Domain Archaea Highlights Roles for Organisms from New Phyla in Anaerobic Carbon Cycling
Cindy J. Castelle,Kelly C. Wrighton,Brian C. Thomas,Laura A. Hug,Christopher T. Brown,Michael J. Wilkins,Kyle R. Frischkorn,Susannah G. Tringe,Andrea Singh,Lye Meng Markillie,Ronald C. Taylor,Kenneth H. Williams,Jillian F. Banfield +12 more
TL;DR: This study sequenced DNA from complex sediment and planktonic consortia from an aquifer adjacent to the Colorado River and reconstructed the first complete genomes for Archaea using cultivation-independent methods, which dramatically expand genomic sampling of the domain Archaea and clarify taxonomic designations within a major superphylum.
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An overview of the Hadoop/MapReduce/HBase framework and its current applications in bioinformatics.
TL;DR: Hadoop and the MapReduce programming paradigm already have a substantial base in the bioinformatics community, especially in the field of next-generation sequencing analysis, and such use is increasing, due to the cost-effectiveness of Hadoop-based analysis on commodity Linux clusters, and in the cloud via data upload to cloud vendors who have implemented Hadooper/HBase.
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Predicting Species-Resolved Macronutrient Acquisition during Succession in a Model Phototrophic Biofilm Using an Integrated ‘Omics Approach
Stephen R. Lindemann,Stephen R. Lindemann,Jennifer M. Mobberley,Jessica K. Cole,L. M. Markillie,Ronald C. Taylor,Eric L. Huang,William B. Chrisler,H. S. Wiley,Mary S. Lipton,William C. Nelson,James K. Fredrickson,Margaret F. Romine +12 more
TL;DR: Niche partitioning around nitrogen sources may structure the community when organisms directly compete for limited phosphate, and niche complementarity around nitrogen Sources may increase community diversity and productivity in phosphate-limited phototrophic communities.
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MicroRNA-223 coordinates cholesterol homeostasis.
Kasey C. Vickers,Kasey C. Vickers,Landstreet,Michael G. Levin,Bassem M. Shoucri,Cynthia L. Toth,Ronald C. Taylor,Brian T. Palmisano,Fatiha Tabet,HL Cui,Kerry-Anne Rye,Praveen Sethupathy,Alan T. Remaley +12 more
TL;DR: A critical role is identified in systemic cholesterol regulation by coordinated posttranscriptional control of multiple genes in lipoprotein and cholesterol metabolism by microRNA-223 (miR-223), an miRNA previously associated with inflammation.