R
Rosa Cheuk
Researcher at Salk Institute for Biological Studies
Publications - 3
Citations - 6467
Rosa Cheuk is an academic researcher from Salk Institute for Biological Studies. The author has contributed to research in topics: Genome & Gene. The author has an hindex of 3, co-authored 3 publications receiving 6198 citations. Previous affiliations of Rosa Cheuk include University of Pennsylvania.
Papers
More filters
Journal ArticleDOI
Genome-Wide Insertional Mutagenesis of Arabidopsis thaliana
Jose M. Alonso,Anna Stepanova,Thomas J. Leisse,Christopher J. Kim,Huaming Chen,Paul Shinn,Denise K. Stevenson,Justin Zimmerman,Pascual Barajas,Rosa Cheuk,Carmelita Gadrinab,Collen Heller,Albert Jeske,Eric Koesema,Cristina C. Meyers,Holly Parker,Lance Prednis,Yasser Ansari,Nathan Choy,Hashim Deen,Michael Geralt,Nisha Hazari,Emily Hom,Meagan Karnes,Celene Mulholland,Ral Ndubaku,Ian Thomas Schmidt,Plinio Guzmán,Laura Aguilar-Henonin,Markus Schmid,Detlef Weigel,David E. Carter,Trudy Marchand,Eddy Risseeuw,Debra Brogden,Albana Zeko,William L. Crosby,Charles C. Berry,Joseph R. Ecker +38 more
TL;DR: Genome-wide analysis of the distribution of integration events revealed the existence of a large integration site bias at both the chromosome and gene levels, and insertion mutations were identified in genes that are regulated in response to the plant hormone ethylene.
Journal ArticleDOI
Empirical analysis of transcriptional activity in the Arabidopsis genome.
Kayoko Yamada,Jun Lim,Joseph M. Dale,Huaming Chen,Huaming Chen,Paul Shinn,Paul Shinn,Curtis J. Palm,Audrey Southwick,Hank C. Wu,Christopher Kim,Christopher Kim,Michelle Nguyen,Paul K. Pham,Rosa Cheuk,Rosa Cheuk,George Karlin-Newmann,Shirley X. Liu,Bao Lam,Hitomi Sakano,Troy Wu,Guixia Yu,Molly Miranda,Hong L. Quach,Matthew Tripp,Charlie H. Chang,Jeong M. Lee,Mitsue J. Toriumi,Marie M. H. Chan,Carolyn C. Tang,Courtney Onodera,Justine M. Deng,Kenji Akiyama,Yasser Ansari,Takahiro Arakawa,Jenny Banh,Fumika Banno,Leah Bowser,Shelise Brooks,Piero Carninci,Qimin Chao,Nathan Choy,Akiko Enju,Andrew D. Goldsmith,Mani Gurjal,Nancy F. Hansen,Yoshihide Hayashizaki,Chanda Johnson-Hopson,Vickie Hsuan,Kei Iida,Meagan Karnes,Shehnaz Khan,Eric Koesema,Junko Ishida,Paul X. Jiang,Ted Jones,Jun Kawai,Asako Kamiya,Cristina C. Meyers,Maiko Nakajima,Mari Narusaka,Motoaki Seki,Tetsuya Sakurai,Masakazu Satou,Racquel Tamse,Maria Vaysberg,Erika Wallender,Cecilia Wong,Yuki Yamamura,Shiaulou Yuan,Kazuo Shinozaki,Ronald W. Davis,Athanasios Theologis,Joseph R. Ecker,Joseph R. Ecker +74 more
TL;DR: In this paper, a dual experimental strategy was used to verify and correct the initial genome sequence annotation of the reference plant Arabidopsis and identified 5817 novel transcription units including a substantial amount of antisense gene transcription, and 40 genes within the genetically defined centromeres.
Journal ArticleDOI
Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana
Athanasios Theologis,Joseph R. Ecker,Joseph R. Ecker,Curtis J. Palm,Nancy A. Federspiel,Nancy A. Federspiel,Samir Kaul,Owen White,Jose M. Alonso,Hootan Altafi,Rina Araujo,Cheryl Bowman,Shelise Brooks,Eugen Buehler,April Chan,Qimin Chao,Huaming Chen,Rosa Cheuk,Christina W. Chin,Mike K. Chung,Lane Conn,Aaron B. Conway,Andrew R. Conway,Todd Creasy,Ken Dewar,Patrick Dunn,Pelin Etgu,Tamara Feldblyum,Ji Dong Feng,Betty Fong,Claire Fujii,John Gill,Andrew D. Goldsmith,Brian J. Haas,Nancy F. Hansen,Beth Hughes,Lucas Huizar,Jonathan L. Hunter,Jennifer Jenkins,Chanda Johnson-Hopson,Shehnaz Khan,Elizabeth Khaykin,Christopher Kim,Hean L. Koo,Irina Kremenetskaia,David B. Kurtz,Andrea Kwan,Bao Lam,Stephanie Langin-Hooper,Andrew L. Lee,Jeong M. Lee,Catherine A. Lenz,Joycelyn H. Li,Ya Ping Li,Xiaoying Lin,Shirley X. Liu,Zhaoying A. Liu,Jason S. Luros,Rama Maiti,Andre Marziali,Andre Marziali,Jennifer Militscher,Molly Miranda,Michelle Nguyen,William C. Nierman,Brian I. Osborne,Grace Pai,Jeremy Peterson,Paul K. Pham,Michael G. Rizzo,Timothy Rooney,Don Rowley,Hitomi Sakano,Steven L. Salzberg,Jody R. Schwartz,Paul Shinn,Audrey Southwick,Hui Sun,Luke J. Tallon,Gabriel Tambunga,Mitsue J. Toriumi,Christopher D. Town,Teresa Utterback,Susan Van Aken,Maria Vaysberg,Valentina S. Vysotskaia,Valentina S. Vysotskaia,Michelle Walker,Dongying Wu,Guixia Yu,Claire M. Fraser,J. Craig Venter,Ronald W. Davis +92 more
TL;DR: The genome of the flowering plant Arabidopsis thaliana has five chromosomes and the sequence of the largest, chromosome 1, in two contigs of around 14.2 and 14.6 megabases is reported.