S
Scott T. Bates
Researcher at University of Minnesota
Publications - 36
Citations - 13511
Scott T. Bates is an academic researcher from University of Minnesota. The author has contributed to research in topics: Lichen & Biodiversity. The author has an hindex of 28, co-authored 36 publications receiving 10530 citations. Previous affiliations of Scott T. Bates include American Museum of Natural History & National Park Service.
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Towards a unified paradigm for sequence-based identification of fungi
Urmas Kõljalg,Urmas Kõljalg,R. Henrik Nilsson,Kessy Abarenkov,Leho Tedersoo,Andy F. S. Taylor,Andy F. S. Taylor,Mohammad Bahram,Scott T. Bates,Thomas D. Bruns,Johan Bengtsson-Palme,Tony M. Callaghan,Brian Douglas,Tiia Drenkhan,Ursula Eberhardt,Margarita Dueñas,Tine Grebenc,Gareth W. Griffith,Martin Hartmann,Paul M. Kirk,Petr Kohout,Petr Kohout,Ellen Larsson,Björn D. Lindahl,Robert Lücking,María P. Martín,P. Brandon Matheny,Nhu H. Nguyen,Tuula Niskanen,Jane Oja,Kabir G. Peay,Ursula Peintner,Marko Peterson,Kadri Põldmaa,Lauri Saag,Irja Saar,Arthur Schüßler,James A. Scott,Carolina Senés,Matthew E. Smith,Ave Suija,Ave Suija,D. Lee Taylor,M. Teresa Telleria,Michael Weiss,Karl-Henrik Larsson +45 more
TL;DR: All fungal species represented by at least two ITS sequences in the international nucleotide sequence databases are now given a unique, stable name of the accession number type, and the term ‘species hypothesis’ (SH) is introduced for the taxa discovered in clustering on different similarity thresholds.
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FUNGuild: An open annotation tool for parsing fungal community datasets by ecological guild
Nhu H. Nguyen,Zewei Song,Scott T. Bates,Sara Branco,Leho Tedersoo,Jon Menke,Jonathan S. Schilling,Peter G. Kennedy +7 more
TL;DR: Fungi typically live in highly diverse communities composed of multiple ecological guilds, and FUNGuild is a tool that can be used to taxonomically parse fungal OTUs by ecological guild independent of sequencing platform or analysis pipeline.
Journal ArticleDOI
Using network analysis to explore co-occurrence patterns in soil microbial communities
TL;DR: The potential of exploring inter-taxa correlations to gain a more integrated understanding of microbial community structure and the ecological rules guiding community assembly is demonstrated.
Journal ArticleDOI
Cross-biome metagenomic analyses of soil microbial communities and their functional attributes
Noah Fierer,Jonathan W. Leff,Byron J. Adams,Uffe N. Nielsen,Scott T. Bates,Christian L. Lauber,Sarah M. Owens,Sarah M. Owens,Jack A. Gilbert,Jack A. Gilbert,Diana H. Wall,J. Gregory Caporaso,J. Gregory Caporaso +12 more
TL;DR: As the most comprehensive survey of soil taxonomic, phylogenetic, and functional diversity to date, this study demonstrates that metagenomic approaches can be used to build a predictive understanding of how microbial diversity and function vary across terrestrial biomes.
Journal ArticleDOI
Examining the global distribution of dominant archaeal populations in soil.
Scott T. Bates,Donna Berg-Lyons,J. Gregory Caporaso,William A. Walters,Rob Knight,Noah Fierer +5 more
TL;DR: In this paper, the authors used barcoded pyrosequencing to comprehensively survey archaeal and bacterial communities in 146 soils, representing a multitude of soil and ecosystem types from across the globe.