T
Taishin Kin
Researcher at National Institute of Advanced Industrial Science and Technology
Publications - 31
Citations - 2762
Taishin Kin is an academic researcher from National Institute of Advanced Industrial Science and Technology. The author has contributed to research in topics: Peptide sequence & Aspergillus oryzae. The author has an hindex of 16, co-authored 31 publications receiving 2620 citations. Previous affiliations of Taishin Kin include National Institute of Technology and Evaluation.
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Journal ArticleDOI
Genome sequencing and analysis of Aspergillus oryzae
Masayuki Machida,Kiyoshi Asai,Motoaki Sano,Toshihiro Tanaka,Toshitaka Kumagai,Goro Terai,Goro Terai,Ken Ichi Kusumoto,Toshihide Arima,Osamu Akita,Yutaka Kashiwagi,Keietsu Abe,Katsuya Gomi,Hiroyuki Horiuchi,Katsuhiko Kitamoto,Tetsuo Kobayashi,Michio Takeuchi,David W. Denning,James E. Galagan,William C. Nierman,Jiujiang Yu,David B. Archer,Joan W. Bennett,Deepak Bhatnagar,Thomas E. Cleveland,Natalie D. Fedorova,Osamu Gotoh,Hiroshi Horikawa,Akira Hosoyama,Masayuki Ichinomiya,Rie Igarashi,Kazuhiro Iwashita,Praveen R. Juvvadi,Masashi Kato,Yumiko Kato,Taishin Kin,Akira Kokubun,Hiroshi Maeda,Noriko Maeyama,Jun-ichi Maruyama,Hideki Nagasaki,Tasuku Nakajima,Ken Oda,Kinya Okada,Ian T. Paulsen,Kazutoshi Sakamoto,Toshihiko Sawano,Mikio Takahashi,Kumiko Takase,Yasunobu Terabayashi,Jennifer R. Wortman,Osamu Yamada,Youhei Yamagata,Hideharu Anazawa,Yoji Hata,Yoshinao Koide,Takashi Komori,Yasuji Koyama,Toshitaka Minetoki,Sivasundaram Suharnan,Akimitsu Tanaka,Katsumi Isono,Satoru Kuhara,Naotake Ogasawara,Hisashi Kikuchi +64 more
TL;DR: Specific expansion of genes for secretory hydrolytic enzymes, amino acid metabolism and amino acid/sugar uptake transporters supports the idea that A. oryzae is an ideal microorganism for fermentation.
Journal ArticleDOI
Drosophila endogenous small RNAs bind to Argonaute 2 in somatic cells
Yoshinori Kawamura,Kuniaki Saito,Kuniaki Saito,Taishin Kin,Yukiteru Ono,Kiyoshi Asai,Takafumi Sunohara,Tomoko N. Okada,Tomoko N. Okada,Mikiko C. Siomi,Mikiko C. Siomi,Haruhiko Siomi,Haruhiko Siomi +12 more
TL;DR: These findings indicate that different types of small RNAs and Argonautes are used to repress retrotransposons in germline and somatic cells in Drosophila.
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Marginalized kernels for biological sequences.
TL;DR: This work proposes a reasonable way of designing a kernel when objects are generated from latent variable models (e.g., HMM), and derives several marginalized kernels useful for biological sequences.
Journal ArticleDOI
fRNAdb: a platform for mining/annotating functional RNA candidates from non-coding RNA sequences
Taishin Kin,Kouichirou Yamada,Goro Terai,Hiroaki Okida,Yasuhiko Yoshinari,Yukiteru Ono,Aya Kojima,Yuki Kimura,Takashi Komori,Kiyoshi Asai,Kiyoshi Asai +10 more
TL;DR: The fRNAdb database as discussed by the authors provides a large collection of non-coding transcripts including annotated/non-annotated sequences from the H-inv database, NONCODE and RNAdb.
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A fast structural multiple alignment method for long RNA sequences.
TL;DR: A fast algorithm for structural alignment of multiple RNA sequences that is an extension of the pairwise structural alignment method (implemented in SCARNA) that is fast enough for large-scale analyses with accuracies at least comparable to those of existing algorithms.