K
Katsuya Gomi
Researcher at Tohoku University
Publications - 178
Citations - 9570
Katsuya Gomi is an academic researcher from Tohoku University. The author has contributed to research in topics: Aspergillus oryzae & Gene. The author has an hindex of 49, co-authored 172 publications receiving 8629 citations. Previous affiliations of Katsuya Gomi include National Institute of Advanced Industrial Science and Technology & Hokkaido University.
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Journal ArticleDOI
Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus
William C. Nierman,William C. Nierman,Arnab Pain,Michael J. Anderson,Jennifer R. Wortman,Jennifer R. Wortman,H. Stanley Kim,H. Stanley Kim,Javier Arroyo,Matthew Berriman,Keietsu Abe,David B. Archer,Clara Bermejo,Joan W. Bennett,Paul Bowyer,Dan Chen,Dan Chen,Matthew Collins,Richard Coulsen,Robert L. Davies,Paul S. Dyer,Mark L. Farman,Nadia Fedorova,Nadia Fedorova,Natalie D. Fedorova,Natalie D. Fedorova,T. Feldblyum,T. Feldblyum,Reinhard Fischer,Nigel Fosker,Audrey Fraser,José Luis García,María Josefa Marcos García,Ariette Goble,Gustavo H. Goldman,Katsuya Gomi,Sam Griffith-Jones,R. Gwilliam,Brian J. Haas,Brian J. Haas,Hubertus Haas,David Harris,H. Horiuchi,Jiaqi Huang,Jiaqi Huang,Sean Humphray,Javier Jiménez,Nancy P. Keller,H. Khouri,H. Khouri,Katsuhiko Kitamoto,Tetsuo Kobayashi,Sven Konzack,Resham Kulkarni,Resham Kulkarni,Toshitaka Kumagai,Anne Lafton,Jean-Paul Latgé,Weixi Li,Angela Lord,Charles Lu,Charles Lu,William H. Majoros,William H. Majoros,Gregory S. May,Bruce L. Miller,Yasmin Ali Mohamoud,Yasmin Ali Mohamoud,María Molina,Michel Monod,Isabelle Mouyna,Stephanie Mulligan,Stephanie Mulligan,Lee Murphy,Susan O'Neil,Ian T. Paulsen,Ian T. Paulsen,Miguel A. Peñalva,Mihaela Pertea,Mihaela Pertea,Claire Price,Bethan L. Pritchard,Michael A. Quail,Ester Rabbinowitsch,Neil Rawlins,Marie Adele Rajandream,Utz Reichard,Hubert Renauld,Geoffrey D. Robson,Santiago Rodríguez de Córdoba,José Manuel Rodríguez-Peña,Catherine M. Ronning,Catherine M. Ronning,Simon Rutter,Steven L. Salzberg,Steven L. Salzberg,Miguel del Nogal Sánchez,Juan C. Sánchez-Ferrero,David L. Saunders,Kathy Seeger,Rob Squares,S. Squares,Michio Takeuchi,Fredj Tekaia,Geoffrey Turner,Carlos R. Vázquez de Aldana,J. Weidman,J. Weidman,Owen White,Owen White,John Woodward,Jae-Hyuk Yu,Claire M. Fraser,Claire M. Fraser,James E. Galagan,Kiyoshi Asai,Masayuki Machida,Neil Hall,Neil Hall,Bart Barrell,David W. Denning +120 more
TL;DR: The Af293 genome sequence provides an unparalleled resource for the future understanding of this remarkable fungus and revealed temperature-dependent expression of distinct sets of genes, as well as 700 A. fumigatus genes not present or significantly diverged in the closely related sexual species Neosartorya fischeri, many of which may have roles in the pathogenicity phenotype.
Journal ArticleDOI
Genome sequencing and analysis of Aspergillus oryzae
Masayuki Machida,Kiyoshi Asai,Motoaki Sano,Toshihiro Tanaka,Toshitaka Kumagai,Goro Terai,Goro Terai,Ken Ichi Kusumoto,Toshihide Arima,Osamu Akita,Yutaka Kashiwagi,Keietsu Abe,Katsuya Gomi,Hiroyuki Horiuchi,Katsuhiko Kitamoto,Tetsuo Kobayashi,Michio Takeuchi,David W. Denning,James E. Galagan,William C. Nierman,Jiujiang Yu,David B. Archer,Joan W. Bennett,Deepak Bhatnagar,Thomas E. Cleveland,Natalie D. Fedorova,Osamu Gotoh,Hiroshi Horikawa,Akira Hosoyama,Masayuki Ichinomiya,Rie Igarashi,Kazuhiro Iwashita,Praveen R. Juvvadi,Masashi Kato,Yumiko Kato,Taishin Kin,Akira Kokubun,Hiroshi Maeda,Noriko Maeyama,Jun-ichi Maruyama,Hideki Nagasaki,Tasuku Nakajima,Ken Oda,Kinya Okada,Ian T. Paulsen,Kazutoshi Sakamoto,Toshihiko Sawano,Mikio Takahashi,Kumiko Takase,Yasunobu Terabayashi,Jennifer R. Wortman,Osamu Yamada,Youhei Yamagata,Hideharu Anazawa,Yoji Hata,Yoshinao Koide,Takashi Komori,Yasuji Koyama,Toshitaka Minetoki,Sivasundaram Suharnan,Akimitsu Tanaka,Katsumi Isono,Satoru Kuhara,Naotake Ogasawara,Hisashi Kikuchi +64 more
TL;DR: Specific expansion of genes for secretory hydrolytic enzymes, amino acid metabolism and amino acid/sugar uptake transporters supports the idea that A. oryzae is an ideal microorganism for fermentation.
Journal ArticleDOI
Genomics of Aspergillus oryzae: Learning from the History of Koji Mold and Exploration of Its Future
TL;DR: The genome comparison and transcriptome analysis uncovered mechanisms for effective degradation of raw materials in SSC and found the temperature reduction process empirically adopted in the traditional soy-sauce fermentation processes has been found to be important to keep strong expression of the A. oryzae-specific extracellular hydrolases.
Journal ArticleDOI
Integrative Transformation of Aspergillus oryzae with a Plasmid Containing the Aspergillus nidulans argB Gene
TL;DR: Southern blot analysis revealed that transformation of Aspergillus oryzae had occurred by integration of multiple tandem copies of plasmid DNA into the host genome through non-homologous recombination.
Journal ArticleDOI
Thiamine-regulated gene expression of Aspergillus oryzae thiA requires splicing of the intron containing a riboswitch-like domain in the 5'-UTR.
Takafumi Kubodera,Mutsumi Watanabe,Kumi Yoshiuchi,Nobuo Yamashita,Akira Nishimura,Susumu Nakai,Katsuya Gomi,Hideo Hanamoto +7 more
TL;DR: Observations suggest a novel gene expression regulatory mechanism in filamentous fungi, in which exogenous thiamine controls intron splicing to regulate gene expression.