W
Won-Ki Cho
Researcher at Massachusetts Institute of Technology
Publications - 20
Citations - 1608
Won-Ki Cho is an academic researcher from Massachusetts Institute of Technology. The author has contributed to research in topics: Transcription (biology) & RNA polymerase II. The author has an hindex of 10, co-authored 16 publications receiving 1122 citations. Previous affiliations of Won-Ki Cho include KAIST & Pohang University of Science and Technology.
Papers
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Journal ArticleDOI
Mediator and RNA polymerase II clusters associate in transcription-dependent condensates
Won-Ki Cho,Jan-Hendrik Spille,Micca Hecht,Choongman Lee,Charles H. Li,Valentin Grube,Valentin Grube,Ibrahim I Cisse +7 more
TL;DR: This work used live-cell superresolution and light-sheet imaging to study the organization and dynamics of the Mediator coactivator and RNA polymerase II (Pol II) directly and suggests that large clusters of Mediator, recruited by transcription factors at large or clustered enhancer elements, interact with large Pol II clusters in transcriptional condensates in vivo.
Journal ArticleDOI
RNA Polymerase II cluster dynamics predict mRNA output in living cells
Won-Ki Cho,Namrata Jayanth,Brian P. English,Takuma Inoue,J Owen Andrews,William Conway,Jonathan B. Grimm,Jan-Hendrik Spille,Luke D. Lavis,Timothée Lionnet,Ibrahim I Cisse +10 more
TL;DR: A live-cell super-resolution approach is developed to uncover the correlation between mRNA synthesis and the dynamics of RNA Polymerase II (Pol II) clusters at a gene locus and suggest that transient clustering of Pol II may constitute a pre-transcriptional regulatory event that predictably modulates nascent mRNA output.
Journal ArticleDOI
MutS switches between two fundamentally distinct clamps during mismatch repair
Cherlhyun Jeong,Won-Ki Cho,Kyung Song,Christopher Cook,Tae-Young Yoon,Changill Ban,Richard Fishel,Jong-Bong Lee +7 more
TL;DR: It is determined that the mismatch repair (MMR) initiation protein MutS forms a transient clamp that scans duplex DNA for mismatched nucleotides by 1D diffusion for 1 s (~700 base pairs) while in continuous rotational contact with the DNA.
Journal ArticleDOI
ATP Alters the Diffusion Mechanics of MutS on Mismatched DNA
Won-Ki Cho,Cherlhyun Jeong,Daehyung Kim,Minhyeok Chang,Kyung-Mi Song,Jeungphill Hanne,Changill Ban,Richard Fishel,Jong-Bong Lee +8 more
TL;DR: It is shown that ATP binding alters the MutS diffusion mechanics on DNA, which has a number of implications for the mechanism of MMR.
Journal ArticleDOI
Super-resolution imaging of fluorescently labeled, endogenous RNA Polymerase II in living cells with CRISPR/Cas9-mediated gene editing
TL;DR: In this article, the endogenous RNA polymerase II (Pol II) was labeled in mouse embryonic fibroblast (MEF) cells using the CRISPR/Cas9 gene editing system using single-molecule based super-resolution imaging in the living cells.