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Comparison of dissipative particle dynamics and Langevin thermostats for out-of-equilibrium simulations of polymeric systems.

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TLDR
This work compares and characterize the behavior of Langevin and dissipative particle dynamics (DPD) thermostats in a broad range of nonequilibrium simulations of polymeric systems and quantitatively analyzes the efficiency and limitations of different Langevine and DPD thermostat implementations.
Abstract
In this work we compare and characterize the behavior of Langevin and dissipative particle dynamics (DPD) thermostats in a broad range of nonequilibrium simulations of polymeric systems. Polymer brushes in relative sliding motion, polymeric liquids in Poiseuille and Couette flows, and brush-melt interfaces are used as model systems to analyze the efficiency and limitations of different Langevin and DPD thermostat implementations. Widely used coarse-grained bead-spring models under good and poor solvent conditions are employed to assess the effects of the thermostats. We considered equilibrium, transient, and steady state examples for testing the ability of the thermostats to maintain constant temperature and to reproduce the underlying physical phenomena in nonequilibrium situations. The common practice of switching off the Langevin thermostat in the flow direction is also critically revisited. The efficiency of different weight functions for the DPD thermostat is quantitatively analyzed as a function of the solvent quality and the nonequilibrium situation.

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Multiscale modeling of emergent materials: biological and soft matter

TL;DR: This review of current related issues in multiscale modeling of soft and biological matter focuses on solvent-free modeling which offers a different route to coarse graining by integrating out the degrees of freedom associated with solvent.
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Effects of Temperature Control Algorithms on Transport Properties and Kinetics in Molecular Dynamics Simulations

TL;DR: This study investigates how six well-established thermostat algorithms applied with different coupling strengths and to different degrees of freedom affect the dynamics of various molecular systems.
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Polymer brushes on flat and curved surfaces: How computer simulations can help to test theories and to interpret experiments

TL;DR: Theoretical descriptions of static properties of polymer brushes are reviewed, with an emphasis on monodisperse macromolecules grafted to planar, cylindrical, or spherical substrates as mentioned in this paper.
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Integration Schemes for Dissipative Particle Dynamics Simulations: From Softly Interacting Systems Towards Hybrid Models

TL;DR: In this paper, the authors examine the performance of various commonly used integration schemes in dissipative particle dynamics simulations and find that many commonly used integrators may give rise to surprisingly pronounced artifacts in physical observables such as the radial distribution function, the compressibility, and the tracer diffusion coefficient.
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Interfacial slip on rough, patterned and soft surfaces: a review of experiments and simulations.

TL;DR: This work is intended as an entry-level review for researchers moving into the field of interfacial slip, and as an indication of outstanding problems that need to be addressed for the field to reach full maturity.
References
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Journal ArticleDOI

Understanding Molecular Simulation

Daan Frenkel, +1 more
- 01 Oct 2001 - 
Journal ArticleDOI

Dissipative particle dynamics : bridging the gap between atomistic and mesoscopic simulation

TL;DR: In this article, a review of dissipative particle dynamics (DPD) as a mesoscopic simulation method is presented, and a link between these parameters and χ-parameters in Flory-Huggins-type models is made.
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Simulating microscopic hydrodynamic phenomena with dissipative particle dynamics

Abstract: We present a novel method for simulating hydrodynamic phenomena. This particle-based method combines features from molecular dynamics and lattice-gas automata. It is shown theoretically as well as in simulations that a quantitative description of isothermal Navier-Stokes flow is obtained with relatively few particles. Computationally, the method is much faster than molecular dynamics, and the at same time it is much more flexible than lattice-gas automata schemes.
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A calculation of the viscous force exerted by a flowing fluid on a dense swarm of particles

TL;DR: In this paper, the viscous force exerted by a flowing fluid on a dense swarm of particles is described by a modification of Darcy's equation, which was necessary in order to obtain consistent boundary conditions.
Journal ArticleDOI

Statistical Mechanics of Dissipative Particle Dynamics.

TL;DR: In this paper, the authors derived the stochastic differential equations corresponding to the updating algorithm of Dissipative Particle Dynamics (DPD), and the corresponding Fokker-Planck equation.
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