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Open AccessJournal ArticleDOI

Core Principles of Bacterial Autoinducer Systems

TLDR
It is argued that the general purpose of AI systems is the homeostatic control of costly cooperative behaviors, including, but not limited to, secreted public goods.
Abstract
Autoinduction (AI), the response to self-produced chemical signals, is widespread in the bacterial world. This process controls vastly different target functions, such as luminescence, nutrient acquisition, and biofilm formation, in different ways and integrates additional environmental and physiological cues. This diversity raises questions about unifying principles that underlie all AI systems. Here, we suggest that such core principles exist. We argue that the general purpose of AI systems is the homeostatic control of costly cooperative behaviors, including, but not limited to, secreted public goods. First, costly behaviors require preassessment of their efficiency by cheaper AI signals, which we encapsulate in a hybrid “push-pull” model. The “push” factors cell density, diffusion, and spatial clustering determine when a behavior becomes effective. The relative importance of each factor depends on each species' individual ecological context and life history. In turn, “pull” factors, often stress cues that reduce the activation threshold, determine the cellular demand for the target behavior. Second, control is homeostatic because AI systems, either themselves or through accessory mechanisms, not only initiate but also maintain the efficiency of target behaviors. Third, AI-controlled behaviors, even seemingly noncooperative ones, are generally cooperative in nature, when interpreted in the appropriate ecological context. The escape of individual cells from biofilms, for example, may be viewed as an altruistic behavior that increases the fitness of the resident population by reducing starvation stress. The framework proposed here helps appropriately categorize AI-controlled behaviors and allows for a deeper understanding of their ecological and evolutionary functions.

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Microbial Surface Colonization and Biofilm Development in Marine Environments

TL;DR: Recent progress in the study of marine microbial surface colonization and biofilm development is synthesized and discussed and questions are posed for targeted investigation of surface-specific community-level microbial features to advance understanding ofsurface-associated microbial community ecology and the biogeochemical functions of these communities.
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Human microbiomes and their roles in dysbiosis, common diseases, and novel therapeutic approaches

TL;DR: An outlook on recent findings on the human microbiomes, their impact on health and diseases, and on the development of targeted therapies is provided.
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Chemical signaling involved in plant–microbe interactions

TL;DR: Different plant-microbe associations from colonization to microbial establishment processes in plants along with future prospects, including agricultural benefits are described.
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Beneficial effects of bacteria-plant communication based on quorum sensing molecules of the N -acyl homoserine lactone group

TL;DR: This review focuses on the impact of AHLs on plant growth and AHL-priming, as one of the most understood phenomena in respect to the inter-kingdom interactions based on AHL-quorum sensing molecules, and the potential benefits of the understanding of bacteria-plant interaction for the future agricultural applications.
References
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Journal ArticleDOI

The Genetical Evolution of Social Behaviour. I

TL;DR: A genetical mathematical model is described which allows for interactions between relatives on one another's fitness and a quantity is found which incorporates the maximizing property of Darwinian fitness, named “inclusive fitness”.
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Quorum sensing in bacteria: the LuxR-LuxI family of cell density-responsive transcriptional regulators.

TL;DR: How the marine luminescent bacterium V. fischeri uses the LuxR and LuxI proteins for intercellular communication is reviewed and a newly discovered family of LuxRand LuxI homologs in diverse bacterial species is described.
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Inverse density dependence and the Allee effect

TL;DR: The Allee effect describes a scenario in which populations at low numbers are affected by a positive relationship between population growth rate and density, which increases their likelihood of extinction.
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Bacterial Quorum Sensing: Its Role in Virulence and Possibilities for Its Control

TL;DR: This work reviews the quorum-sensing circuits of Staphylococcus aureus, Bacillus cereus, Pseudomonas aeruginosa, and Vibrio cholerae and examines recent efforts to inhibit quorum sensing in these pathogens with the goal of designing novel antimicrobial therapeutics.
Journal ArticleDOI

Bacterial Quorum-Sensing Network Architectures

TL;DR: It is argued that the Vibrio quorum-sensing systems are optimally designed to precisely translate extracellular autoinducer information into internal changes in gene expression.
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How can AI be used to study bacteria?

The paper does not provide information on how AI can be used to study bacteria. The paper discusses the core principles of bacterial autoinducer systems and their ecological and evolutionary functions.