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Effect of Hydrogen Bonds on the Dielectric Properties of Interfacial Water.

TLDR
This work investigates the effect of the orientation of hydrogen bonds on the dielectric properties of confined water using molecular dynamics simulations and finds a reduced rotational diffusion coefficient for water molecules close to the solid surface.
Abstract
The dielectric constant for water is reduced under confinement. Although this phenomenon is well known, the underlying physical mechanism for the reduction is still in debate. In this work, we investigate the effect of the orientation of hydrogen bonds on the dielectric properties of confined water using molecular dynamics simulations. We find a reduced rotational diffusion coefficient for water molecules close to the solid surface. The reduced rotational diffusion arises due to the hindered rotation away from the plane parallel to the channel walls. The suppressed rotation in turn affects the orientational polarization of water, leading to a low value for the dielectric constant at the interface. We attribute the constrained out-of-plane rotation to originate from a higher density of planar hydrogen bonds formed by the interfacial water molecules.

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Eect of Hydrogen Bonds on the Dielectric Properties of Interfacial
Water
Sleeba Varghese,
Sridhar Kumar Kannam,
,
Jesper Schmidt Hansen,
§
and Sarith P. Sathian*
,
Department of Applied Mechanics, Indian Institute of Technology Madras, Chennai 600036, India
Faculty of Science, Engineering and Technology, Swinburne University of Technology, Melbourne, Victoria 3122, Australia
§
Department of Science and Environment, Roskilde University, Roskilde 4000, Denmark
School of Applied Sciences, RMIT University, Melbourne, Victoria 3001, Australia
ABSTRACT: The dielectric constant for water is reduced
under connement. Although this phenomenon is well known,
the underlying physical mechanism for the reduction is still in
debate. In this w ork, we investigate t he eect of the
orientation of hydrogen bonds on the dielectric properties
of conned water using molecular dynamics simulations. We
nd a reduced rotational diusion coecient for water
molecules close to the solid surface. The reduced rotational
diusion arises due to the hindered rotation away from the
plane parallel to the channel walls. The suppressed rotation in
turn aects the orientational polarization of water, leading to a
low value for the dielectric constant at the interface. We
attribute the constrained out-of-plane rotation to originate
from a higher density of planar hydrogen bonds formed by the interfacial water molecules.
INTRODUCTION
Connement induces signicant changes in the structural and
dynamical properties of water with most perturbations being
extremely local and observable only within a few molecular
layers close to the surface.
13
However, recent studies indicate
that the eect of connement on the dielectric properties of
water extends well beyond the interfacial regions.
4,5
The
extremely low dielectric constant of nanoconned water also
suggests a far more signicant inuence by the interfaces on
the dielectric properties, when the connement width reduces
to nanometric scales.
510
Despite these data available on the
dielectric permittivity of water, knowledge on the physical
origin of the anomalous dielectric behavior of conned water is
still not fully complete. Understanding the underlying physical
mechanism of the dielectric response is essential in the
solvation dynamics of aqueous solutions
1113
that are primarily
governed by the bulk dielectric properties of the solvent as well
as in the development of nanoscale electromechanical
devices.
14,15
Experimental investigations of the problem are very
complicated. This has led to the development of theoretical
and computer simulation techniques to calculate the molecular
dielectric response in highly conned geometries. An
appropriate theoretical model should at least be able to
reproduce the experimental dielectric constant of homoge-
neous water. The KirkwoodFro
hlich uctuation formula
16,17
has shown satisfactory results on the static dielectric constant
of homogeneous water for dierent temperature ranges.
18,19
However, this approach has signicant limitations when
applied to conned systems. For instance, while calculating
permittivity of an interfacial layer, the KirkwoodFro
hlich
uctuation formula neglects the dipolar contribution of water
molecules away from the layer but is signicant due to the
substantial ordering of water molecules near a solid sur-
face.
20,21
Ballenegger and Hansen
22
addressed these issues and
derived a correct uctuation formula to calculate the dielectric
permittivity of conned polar uids. They found that under
connement, the dielectric constant is a space-dependent
dielectric response function with components parallel and
perpendicular to the surface. Later, Bonthuis et al.
23
modied
the uctuation formula to calculate the dielectric properties of
molecules with higher multipole moments (e.g., water). Both
studies observed the emergence of singularities in the
perpendicular dielectric response function at the molecular
layers close to the solid surface. Further investigations into the
interfacial dielectric properties revealed the existence of an
abnormally high polarization eld close to the surface, which
overscreens any external electric eld.
22,23
The consequence of
this overscreening phenomenon is the negative values observed
in the dielectric permittivity prole of water close to the solid
surface, which ultimately leads to a low value of the eective
dielectric constant in the interface regions.
24
Experimental and simulation studies show a substantial
decrement in the perpendicular component of dielectric
Received: February 24, 2019
Revised: May 22, 2019
Published: May 23, 2019
Article
pubs.acs.org/Langmuir
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© 2019 American Chemical Society 8159 DOI: 10.1021/acs.langmuir.9b00543
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permittivity for a few layers of water molecules near the solid
surface.
2327
Even though this interfacial region with the
reduced dielectric response extends only up to a few
nanometers, under connement, its inuence on the overall
dielectric permittivity becomes quite signicant. Molecular
dynamics simulation studies reported an extremely low
eective dielectric constant for water under nanoconned
geometries.
6,8
A recent experiment on the water con ned
between hexagonal boron nitride layers substantiated this low
dielectric response under nanoconnement and it was
observed that water regains its bulk permittivity only when
channel widths are higher than 100 nm.
9
This reduced dielectric response under connement is
modeled on the basis of the capacitor model approach, which
considers the overall permittivity as a series of low-permittivity
interfacial regions and a nominal permittivity bulk region.
9,28
Although the capacitor model explains the overall permittivity
of a conned system, the physical origin of the reduced
dielectric response is still to be pondered. Understanding the
physical mechanism of this reduced dielectric response at the
interfaces requires investigation into the distinctive structural
features of water close to solid surfaces, which can be
rationalized in terms of intermolecular hydrogen bonding of
water. Hence, like most anomalous properties, any deviation in
the dielectric behavior of water, we here conjecture, should
also arise from the restruct uring of its hydrogen-bo nd
network.
2931
Despitethelargeamountofknowledge
gathered, the inuence of hydrogen bonds on the dielectric
permittivity of water is still unclear.
26,27,31,32
In this work, we investigate the orientation of hydrogen
bonds and its correlation with the dielectric permittivity of
conned water. We nd a higher density of hydrogen bonds
paral lel to the walls at the solidwater interface when
compared with the bulk liquid. This enhanced planar hydrogen
bond network constrains the rotation of water molecules to the
planes parallel to the channel walls. This extensive network of
planar hydrogen bonds indicates that the reorientation of water
molecules in the direction perpendicular to the channel walls is
energetically unfavorable. The consequence will be low
polarizability of the interfacial water molecules under an
external electric eld. The next section provides a detailed
description of the molecular dynamics simulation methods
employed, which is followed by a section on the Results and
Discussion.
METHODS
We perform molecular dynamics simulations of a graphene nano-
channel enclosing SPC/E
33
water using the large atomic/molecular
massively parallel simulator
34
package. The bond and angular
vibrations of each water molec ule are constrained using the
SHAKE
35
algorithm. The SPC/E water model has a dipole moment
of 2.35 D, in agreement with the experimental value of 2.9 ± 0.6 D.
36
Graphene sheets are placed in the xy plane with periodicity in both
directions, and z is the perpendicular or conned direction, as shown
in Figure 1. Liquid-surface chemical reactions and atomic and
electronic polarizability eects are neglected. The graphene walls are
kept as rigid, uncharged, and electrically transparent throughout the
simulations. Each hydrogen atom carries a partial charge of 0.4238e
and oxygen atoms carry a partial charge of 0.8476e, where e is the
elementary charge. The repulsive and attractive parts of van der Waals
interaction are modeled using the pairwise additive Lennard-Jones
(LJ) potential with a cuto length of 10 Å. The van der Waals
parameters for watercarbon (WC) interaction (ϵ
WC
= 0.09369 kcal/
mol, σ
WC
= 3.19 Å) are taken from Werder et al.
37
The Lennard-Jones
parameters for oxygenoxygen (OO) interaction are ϵ
OO
= 0.15535
kcal/mol and σ
OO
= 3.166 Å, and Lennard-Jones interaction
coecients are zero for hydrogen atoms. The short-range Coulombic
interactions with the charged sites are also modeled with the same
truncation cuto of 10 Å. Long-range electrostatic interactions are
calculated using the Ewald algorithm with a particleparticle-
particlemesh solver
38
of LAMMPS
34,39
with a relative root mean
square error in the per-atom force calculations below 1 × 10
4
.
Nonperiodicity in the z-direction is accommodated in the Ewald
algorithm by inserting empty volumes above the channel walls such
that the extended conned dimension is 3 times the actual channel
size and a correction term in the calculation of long-range Coulombic
forces.
34,39
The corrected Ewald algorithm is known as EW3DC.
39
The simulation box dimensions for the graphene channel in the xy
plane are L
x
= 34 Å and L
y
= 32 Å. Channel width is kept at 40 Å.
Water up to 5 Å from the graphene surface (05 and 3540 Å, which
includes the density peaks near the wall) is considered as interfacial
water.
3
The equilibrium density for water inside a nanochannel is
obtained by immersing our graphene sheets inside a 50 × 50 × 60 Å
3
water reservoir at the ambient conditions of 1.01 bar pressure and
temperature of 300 K. We attained a density of 1.02 g/cm
3
at the
center of the channel, which agrees well with the value reported for
channel widths of similar dimensions.
3
After achieving the density, the
system is equilibrated in the NVT ensemble at 300 K with a Nose
Hoover
40,41
thermostat. To calculate the perpendicular component of
the dielectric constant, an electric eld of strength E
ext
= 0.1 V/Å is
applied in the direction perpendicular to the walls. The total
simulation time is 12 ns. The rst 6 ns is performed without an
electric eld and the rest with the eld. A time step of 1 fs is used
throughout the simulation. Five independent simulations with
dierent initial congurations are performed to calculate the statistical
errors.
RESULTS AND DISCUSSION
Dielectric Response under Connement. The static
dielectric constant for a rigid nonpolarizable water model using
Figure 1. (a) Schematic representation of the conned water system (b) Top view of the graphene channel.
Langmuir Article
DOI: 10.1021/acs.langmuir.9b00543
Langmuir 2019, 35, 81598166
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Ewalds summation under conducting boundary conditions is
given by
18
M
kTV
1
4
3
2
B
π
ϵ= +
⟨⟩
(1)
where M(t)=
i=1
N
μ
i
(t) is the total dipole moment of the
system and μ
i
is the dipole moment of the ith molecule, and k
B
,
T, and V represent Boltzmanns constant, temperature, and
volume of the system, respectively. We obtain the static
dielectric constant of isotropic, homogeneous water as 72 ± 3,
which is in good agreement with the available data in the
literature.
19
Close to the conning walls, nonzero polarization exists even
at a vanishing electric eld. Hence, the net polarization density
upon the application of an external eld E
ext
is given by
22
PP P
E 0
ext
Δ
=⟨ −⟨
(2)
where ...
E
ext
and ...
0
denote the ensemble averages with and
without the applied electric eld, respectively. Due to the
planar symmetry of the conned system in the (x, y) plane, the
average polarization has no components parallel to the surface
(i.e., P = (0, 0, P(z))). Under constant displacement
boundary conditions the net polarization density from eq 2,
relates to the inverse perpendicular dielectric response function
(ϵ
1
(z)) as
22,23,42
z
Pz
E
() 1
()
1
0ext
ϵ=
Δ
ϵ
(3)
where E
ext
is the external electric eld applied perpendicular to
the walls and ϵ
0
is the vacuum dielectric permittivity.
The induced electric eld due to the polarization of water in
response to the external electric eld E
ext
applied across z is
given by
43
Ez
zz
()
()d
z
p
0
ρ
=
′′
ϵ
−∞
(4)
where ρ(z) is the charge density distribution perpendicular to
the surface. According to the multipole expansion approach the
polarization eld is related to the polarization density as
23
P
zEz() ()
0p
=−ϵ
(5)
Therefore, from eqs 4 and 5 we get
P
zzz() ( )d
z
ρ=−
−∞
(6)
The local charge density ρ(z)isdened as
z
LL
qz z()
1
()
xy
i
N
i
i
ρ
δ=⟨
(7)
where q
i
is the charge of ith atom and the ensemble average is
replaced by a sample average in a bin, with z as the mid-point
of the slab/bin.
Figure 2a plots the net polarization density calculated from
eqs 2 and 6. We observe the net polarization density prole
(ΔP) to be symmetric even though the polarization density
proles with (P
E
ext
) and without (P
0
) electric eld are anti-
symmetric around the channel center. This behavior arises due
to the alignment of water dipoles in the direction of the applied
electric eld (hydrogen atoms point toward the top wall and
oxygen atoms point toward the bottom wall unde r the
inuence of an external eld). Close to the walls, the
perpendicular dielectric permittivity, given in Figure 2b,
shows large amplitude variations similar to the net polarization
density prole. However, from the inset plot of Figure 2b, we
can observe that the dielectric response reaches the bulk value
ϵ
1
1/71 = 0.014 at the center of the channel matching the
previous observations in the case of conned water.
22,44
Similar to eq 2, the net electric eld induced due to the
polarization response under the external electric eld E
ext
is
given by
Ez E z E z() () ()
Epp, p,0
ext
Δ
=−
(8)
From Figure 3a, we observe that the magnitude of polarization
eld response ΔE
p
at the interfaces is much higher than the
magnitude of the applied eld. This results in the over-
screening of the external eld by the polarization eld. The
electric eld screened by the polarization eld can be measured
using a dimensionless quantity called the screening factor
dened as
24
Ez E
S
F()/
pext
≡−Δ
(9)
Using eqs 5 and 9, we can modify eq 3 for the perpendicular
dielectric response ϵ
1
and write it in terms of the screening
factor as
z
Ez
E
z() 1
()
1SF()
1
p
ext
ϵ=+
Δ
=−
(10)
From Figure 3b, we observe that SF > 1 close to the walls,
arming the overscreening phenomenon, which results in
negative values of permittivity, as dened by eq 10, for water
near the graphene walls, and concurs with the previous
observations on conned uids.
2224,42
Close to the surface,
the permittivity 1/ϵ
1
(z) diverges whenever the polarization
eld completely screens the external eld, i.e., SF = 1,
Figure 2. (a) Polarization density prole with (red) and without
(green) an external eld for water conned in a 40 Å channel. The
dashed line represents the variation of the net polarization density
(due to E
ext
= 0.1 V/Å) along the channel width. (b) Inverse dielectric
response of water conned in the 40 Å channel under an external
perpendicular electric eld of E
ext
= 0.1 V/Å, calculated from eq 3.
Figure 3. (a) Change in the polarization eld and (b) variation of the
screening factor, along the channel width under E
ext
= 0.1 V/Å.
Langmuir Article
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indicating the need of a nonlocal description of the dielectric
response especially near the solidwater interfaces, as reported
by Schaaf et al.
45
The eective dielectric constant (ϵ
eff
)atdierent regions in
the channel is calculated from the formula given by Schlaich et
al.
44
zz L
L
()d
1
1
L
L
1eff
eff
1
2
Ä
Ç
Å
Å
Å
Å
Å
Å
Å
Å
Å
Å
É
Ö
Ñ
Ñ
Ñ
Ñ
Ñ
Ñ
Ñ
Ñ
Ñ
Ñ
ϵ=
ϵ
−+
(11)
where L
eff
is the eective width of the region over which the
eective dielectric constant ϵ
eff
acts and L = L
2
L
1
is the
distance enclosed by the region. The dierence between the
eective width and actual width of the region is
LL
eff
δ
=−
(12)
As mentioned earlier (Figure 2b; inset plot), the center of the
channel regains the bulk permittivity of water; hence, with ϵ
eff
= ϵ
bulk
for L
1
=15ÅtoL
2
= 25 Å and using eqs 11 and 12,we
can estimate the value of δ. Now using this value of δ and eq
11, we calculate the eective dielectric constant at dierent
regions of water, which is given in Table 1. We observe a
reduced eective dielectric permittivity for conned water, as
reported in previous studies,
9,28
with the least value of
permittivity shown by the interface regions. The low dielectric
constant at the interface indicates that the interfacial water
molecules restrain themselves from aligning along the direction
of the external eld. We investigate the reason for this
constrained alignment in the following sections.
Orientation of Water Molecules. Since a detailed
analysis on the orientation of water molecules near planar
surfaces has already been performed,
29,46,47
we herein consider
only the key orientational features that are relevant in the study
of the anisotropic dielectric behavior of water under conne-
ment. To re-examine the orientational preference of water
molecules under connement, we chose two di erent angles
formed by a water molecule with the positive direction of the
z-axis, viz., the angle ϕ
μ
, formed by the molecular dipole
moment of water μ
i
and the z-axis, and the angle ϕ
OH
, formed
by the OH bonds of water and the z-axis.
Figure 4 shows the probability density distribution of the
two angles dened above for the interfacial and bulk regions.
Water dipoles and OH bonds in the bulk region have random
orientation, whereas in the interfacial regions, they show
preferential orientation. The peak at cos ϕ
μ
= 0 indicates that
molecular dipoles align parallel to the conning surfaces. The
OH bond distribution shows the presence of two additional
peaks at cos ϕ
OH
= 1 and 1 besides the one at cos ϕ
OH
=0.
This indicates that OH bonds have two preferred orientations:
the rst one, with OH bonds nearly parallel to the surface and
the other with OH bonds parallel or antiparallel to the
direction of z-axis.
To substantiate our observations, we also present the
probability distribution of angles along the channel in Figure 5.
As mentioned above, the molecular dipoles show preferential
orientation only close to the surface (Figure 5a). The higher
intensity of cos ϕ
OH
= 1 near the bottom graphene layer and
cos ϕ
OH
= 1 near the top graphene layer indicates presence of
hydrogen atoms directly pointing to the conning walls. The
normally oriented hydrogen atoms, as observed in our study,
are a peculiar aspect of waterhydrophobic interactions.
29
From the orientational analysis, we observe the interfacial
water molecules to most likely orient along the planes parallel
to the walls of the connement, which results in a substantial
restructuring of the hydrogen bond network at the interfaces.
This preferential orientation of the water molecules is also the
reason for the nonzero polarization observed (Figure 2a) close
to the channel walls even at no external eld, suggesting a
spontaneous ferroelectric behavior for the interfacial water
molecules.
48
Reorientation Times of Water Molecules under
Connement. We analyze the rotational and reorientational
dyna mics of water from the time correlation function C
l
dened as
49
Ct P tuu() ( () (0))
ll
≡⟨ ·
μμ
(13)
where P
l
is the lth Legendre polynomial and u
μ
is a unit vector
parallel to the dipole moment of the molecule. Figure 6a,b
represents the results of ln(C
l
(t)) for l = 1 and 2, at dierent
regions of the conned water system.
The reorientational time τ
l
is obtained from a linear tof
ln(C
l
(t)) to
xb
1
l
τ
=− +
(14)
where b is some constant. For isotropic diusive motion, the
rotational diusion coecient relates to the reorientation time
as
49,50
Table 1. Eective Out-of-Plane Dielectric Constant at
Dierent Regions for a 40 Å Channel
a
region (Å) ϵ
eff
interface [05 and 3540 Å] 5.099 ± 0.443
bulk [1525 Å] 71
total [040 Å] 15.44 ± 2.18
a
Values in square brackets indicate the distance enclosed by the
respective region.
Figure 4. Probability distribution of angular orientation of (a) dipole
moments and (b) OH bonds for bulk and interfacial regions.
Figure 5. Probability distribution of angular orientation of (a) dipole
moments and (b) OH bonds with respect to the distance from
graphene walls.
Langmuir Article
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D
ll
1
(1)
l
r
τ
=
+
(15)
The average values obtained for τ
1
, τ
2
, and D
r
are provided in
Table 2. For water in unconned condition and the bulk region
of the conned system, the values of reorientation times
obtained are in close agreement with the reported values.
51
This contrasts with the values close to the walls, where
molecules reorient themselves on a longer timescale, consistent
with the observations found for water near hydrophobic
substrates.
7,5254
We conjecture this to arise from the
anisotropic rotation of water molecules around the system
axes near the surface. Since the rotational diusion coecient
is inversely proportional to the reorientation time, D
r
decreases
as we move closer to the walls.
Now, we focus on the analysis of reorientation/rotation of
water molecules along dierent axes. The correlation function
C
l
along x, y, and z axes is given by
Ct P tuu() ( () (0))
ll,,
≡⟨ ·
μα μα
(16)
where u
μ,α
is a unit vector parallel to the α-component of the
dipole moment of a molecule and α = x, y,orz. Figure 7a,b
shows ln(C
1
(t)) along x, y, and z axes for the bulk and
interface, which is tted to eq 14 to obtain the reorientation
time.
Figure 7c shows reorientation times along dierent axes for
bulk and interfacial water molecules. In the bulk region, we
observe that τ
xx
τ
yy
τ
zz
whereas in the interfacial region, τ
xx
τ
yy
τ
zz
. This means that in the interface water takes a
much longer time to rotate out of the xy plane than doing a
rotation in the xy plane. We also observe that τ
xx,interface
,
τ
yy,interface
> τ
xx,bulk
, τ
yy,bulk
, and τ
zz,interface
τ
zz,bulk
. This suggests
that a signicant suppression in the dipole rotation is exhibited
in the direction perpendicular to the conning channel.
Orientation of Hydrogen Bonds under Connement.
Molecules are considered to be hydrogen-bonded if r
OO
< 3.5
Å and θ
HOO
<30°, where r
OO
is the distance between the
donor and acceptor oxygen atoms, O and O, and θ
HOO
is the
angle between the OH bond and the OO vector.
51,55,56
The
orientation of hydrogen bonds is analyzed by measuring the
angle made by the hydrogen bonds with the connement axis.
We here conjecture that the estimation of the planar hydrogen
bonds formed by a water molecule can provide information on
the restructuring of the hydrogen bond network under
connement. Figure 8 illustrates the criteria to consider a
hydrogen bond as planar.
Figure 9a demonstrates the distribution of hydrogen bonds
per molecule lying in planes parallel to the conning walls (x
y plane). Planar hydrogen bonds restrict the rotation of water
molecules away from the planes parallel to channel walls. The
interface shows a higher density of planar hydrogen bonds
compared with the bulk. Hence, the reorientation of water
molecules becomes suppressed in the direction perpendicular
to the planes parallel to the conning walls. This explains the
Figure 6. Logarithm of the time correlation functions when (a) l =1
and (b) l = 2 for conned water. The dashed lines show the tted
curves to the logarithm of time correlation functions.
Table 2. Correlation Times and Rotational Diusion
Coecient for Conned and Unconned Water
region (Å) τ
1
(ps) τ
2
(ps) D
r
(ps
1
)
interface 5.2 ± 0.7 2.7 ± 0.5 0.060.09
bulk 4.5 ± 0.1 1.8 ± 0.1 0.090.11
total 4.4 ± 0.1 1.91 ± 0.04 0.090.11
liq. wat 4.23 ± 0.09 1.78 ± 0.03 0.090.12
liq. wat (Expt) 27.5 1.72.6
Figure 7. Logarithm of the time correlation functions along x, y, and z
axes of the system for (a) bulk and (b) interface regions. The dashed
lines show the linear t. (c) Values of reorientation time along
dierent axes for water under connement.
Figure 8. Schematic representation of the criteria to consider a planar
hydrogen bond. A maximum of 10° shift from the xy plane for the
hydrogen bond is tolerated while considering the planarity of H
bonds.
Figure 9. (a) Distribution of planar hydrogen bonds per molecule for
water and (b) probability density distribution of angular orientation of
hydrogen bonds conned in a 40 Å channel. ϕ represents the angle
between the hydrogen bond and z-axis.
Langmuir Article
DOI: 10.1021/acs.langmuir.9b00543
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Journal ArticleDOI

Confinement-Controlled Aqueous Chemistry within Nanometric Slit Pores.

TL;DR: In this article, the effect of confinement on different aspects such as hydrogen bonding, ion diffusion, and charge defect migration of H+(aq) and OH-(aq) in nanoconfined water is reviewed.
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Fast parallel algorithms for short-range molecular dynamics

TL;DR: In this article, three parallel algorithms for classical molecular dynamics are presented, which can be implemented on any distributed-memory parallel machine which allows for message-passing of data between independently executing processors.

Fast parallel algorithms for short-range molecular dynamics

TL;DR: Comparing the results to the fastest reported vectorized Cray Y-MP and C90 algorithm shows that the current generation of parallel machines is competitive with conventional vector supercomputers even for small problems.
Journal ArticleDOI

Numerical Integration of the Cartesian Equations of Motion of a System with Constraints: Molecular Dynamics of n-Alkanes

TL;DR: In this paper, a numerical algorithm integrating the 3N Cartesian equations of motion of a system of N points subject to holonomic constraints is formulated, and the relations of constraint remain perfectly fulfilled at each step of the trajectory despite the approximate character of numerical integration.
Journal ArticleDOI

Canonical dynamics: Equilibrium phase-space distributions

TL;DR: The dynamical steady-state probability density is found in an extended phase space with variables x, p/sub x/, V, epsilon-dot, and zeta, where the x are reduced distances and the two variables epsilus-dot andZeta act as thermodynamic friction coefficients.
Journal ArticleDOI

A unified formulation of the constant temperature molecular dynamics methods

TL;DR: In this article, the authors compared the canonical distribution in both momentum and coordinate space with three recently proposed constant temperature molecular dynamics methods by: (i) Nose (Mol. Phys., to be published); (ii) Hoover et al. [Phys. Rev. Lett. 77, 63 (1983); and (iii) Haile and Gupta [J. Chem. Phys. 79, 3067 (1983).
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Q1. What have the authors contributed in "Effect of hydrogen bonds on the dielectric properties of interfacial water" ?

In this work, the authors investigate the effect of the orientation of hydrogen bonds on the dielectric properties of confined water using molecular dynamics simulations. 

Phys. 2012, 137, No. 104704. (8) Itoh, H.; Sakuma, H. Dielectric constant of water as a function of separation in a slab geometry: a molecular dynamics study. 

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117, 1−19. (35) Ryckaert, J.-P.; Ciccotti, G.; Berendsen, H. J. Numerical integration of the cartesian equations of motion of a system with constraints: molecular dynamics of n-alkanes.