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Journal ArticleDOI

Molecular mapping of soybean aphid resistance genes in PI 567541B

Guorong Zhang, +2 more
- 01 Feb 2009 - 
- Vol. 118, Iss: 3, pp 473-482
TLDR
Two quantitative trait loci (QTLs) controlling the aphid resistance were found using the composite interval mapping method and could be useful in improving soybean aphid resistant genes by marker-assisted selection.
Abstract
The soybean aphid (Aphis glycines Matsumura) is an important pest of soybean [Glycine max (L.) Merr.] in North America since it was first reported in 2000. PI 567541B is a newly discovered aphid resistance germplasm with early maturity characteristics. The objectives of this study were to map and validate the aphid resistance genes in PI 567541B using molecular markers. A mapping population of 228 F3 derived lines was investigated for the aphid resistance in both field and greenhouse trials. Two quantitative trait loci (QTLs) controlling the aphid resistance were found using the composite interval mapping method. These two QTLs were localized on linkage groups (LGs) F and M. PI 567541B conferred resistant alleles at both loci. An additive × additive interaction between these two QTLs was identified using the multiple interval mapping method. These two QTLs combined with their interaction explained most of the phenotypic variation in both field and greenhouse trials. In general, the QTL on LG F had less effect than the one on LG M, especially in the greenhouse trial. These two QTLs were further validated using an independent population. The effects of these two QTLs were also confirmed using 50 advanced breeding lines, which were all derived from PI 567541B and had various genetic backgrounds. Hence, these two QTLs identified and validated in this study could be useful in improving soybean aphid resistance by marker-assisted selection.

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Citations
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Journal ArticleDOI

In Posidonia oceanica cadmium induces changes in DNA methylation and chromatin patterning

TL;DR: The data demonstrate that Cd perturbs the DNA methylation status through the involvement of a specific methyltransferase, linked to nuclear chromatin reconfiguration likely to establish a new balance of expressed/repressed chromatin.
Journal Article

Empirical threshold values for quantitative trait mapping.

Gary A. Churchill, +1 more
- 30 Oct 1994 - 
TL;DR: In this paper, an empirical method based on the concept of permutation test is proposed for estimating threshold values that are tailored to the experimental data at hand, which is demonstrated using two real data sets derived from F(2) and recombinant inbred plant populations.
Journal ArticleDOI

Host plant resistance to aphids in cultivated crops: genetic and molecular bases, and interactions with aphid populations.

TL;DR: This review of the genetic and molecular bases of aphid resistance in crop species emphasizes the limited number of aphids resistance genes and alleles.
Journal ArticleDOI

A new soybean aphid (Hemiptera: Aphididae) biotype identified.

TL;DR: The identification of soybean aphid biotypes that can overcome Rag1 and Rag2 resistance, even before soybean cultivars with the resistance genes have been deployed in production, suggests that there is high variability in virulence within aphid populations present in North America.
Journal ArticleDOI

Achievements and Challenges in Legume Breeding for Pest and Disease Resistance

TL;DR: The recent development of large scale phenotyping, genome sequencing and analysis of gene, protein and metabolite expressions can be of great help to further decipher plant-pathogen interactions and identify key resistance components that may be introgressed into crop plants through breeding.
References
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Journal ArticleDOI

Empirical threshold values for quantitative trait mapping.

TL;DR: An empirical method is described, based on the concept of a permutation test, for estimating threshold values that are tailored to the experimental data at hand, and is demonstrated using two real data sets derived from F(2) and recombinant inbred plant populations.
Journal ArticleDOI

MapChart: Software for the Graphical Presentation of Linkage Maps and QTLs

TL;DR: MapChart is a software package that takes as input the linkage and QTL data and generates charts of linkage maps andQTLs and is exported as vector graphics rather than bitmaps, which makes them easy to rescale and to edit further if desired.
Journal ArticleDOI

Precision mapping of quantitative trait loci.

TL;DR: A new method of QTL mapping is proposed and analyzed in this paper by combining interval mapping with multiple regression, an interval test in which the test statistic on a marker interval is made to be unaffected by QTLs located outside a defined interval.
Journal ArticleDOI

Insect resistance in crop plants.

Reginald H. Painter
- 01 Dec 1951 - 
TL;DR: Taxonomy of Vascular Plants George H. M. Lawrence & Maurice Caullery provides a source of information on theory, principles, & operating procedures in plant taxonomy plus an accounting of all families of plants of North America.
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