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Molecular revision of the genus Wallaceina.

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TLDR
The results of morphological and molecular phylogenetic analyses demonstrated that all Leishmaniinae-bound wallaceinas are just different isolates of the same species that are renamed back to Crithidia brevicula Frolov, Malysheva, 1989.
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This article is published in Protist.The article was published on 2014-09-01. It has received 49 citations till now. The article focuses on the topics: Molecular phylogenetics & Genus.

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Characterization of Two Species of Trypanosomatidae from the Honey Bee Apis mellifera: Crithidia mellificae Langridge and McGhee, and Lotmaria passim n. gen., n. sp.

TL;DR: Phylogenetics unambiguously identify strains BRL/SF as a novel taxonomic unit distinct from C. mellificae and assign all four strains as lineages of a novel clade within the subfamily Leishmaniinae.
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An appraisal of the taxonomy and nomenclature of trypanosomatids presently classified as Leishmania and Endotrypanum.

TL;DR: A taxonomic revision of the dixenous trypanosomatids currently classified as Endotrypanum and Leishmania is proposed, including parasites that do not fall within the subgenera L. deanei, L. enriettii and L. martiniquensis.
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The evolution of trypanosomatid taxonomy

TL;DR: This review incites a dialogue on how the understanding of the relationships between certain trypanosomatids has shifted, and discusses new knowledge that informs the present taxonomy of these important parasites.
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Recent advances in trypanosomatid research: genome organization, expression, metabolism, taxonomy and evolution

TL;DR: There is a need for a more comprehensive review that summarizing recent advances in the studies of trypanosomatids in the last 30 years, a task, which is tried to accomplish with the current paper.
References
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MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0

TL;DR: An advanced version of the Molecular Evolutionary Genetics Analysis software, which currently contains facilities for building sequence alignments, inferring phylogenetic histories, and conducting molecular evolutionary analysis, is released, which enables the inference of timetrees, as it implements the RelTime method for estimating divergence times for all branching points in a phylogeny.
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MUSCLE: multiple sequence alignment with high accuracy and high throughput

TL;DR: MUSCLE is a new computer program for creating multiple alignments of protein sequences that includes fast distance estimation using kmer counting, progressive alignment using a new profile function the authors call the log-expectation score, and refinement using tree-dependent restricted partitioning.
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MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice across a Large Model Space

TL;DR: The new version provides convergence diagnostics and allows multiple analyses to be run in parallel with convergence progress monitored on the fly, and provides more output options than previously, including samples of ancestral states, site rates, site dN/dS rations, branch rates, and node dates.
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Kinetoplast DNA network: evolution of an improbable structure.

TL;DR: Kinetoplast DNA (kDNA) is the most structurally complex mitochondrial DNA in nature as mentioned in this paper and is known as a giant network of thousands of catenated circular DNAs.
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Phylogeny of trypanosomes as inferred from the small and large subunit rRNAs: implications for the evolution of parasitism in the trypanosomatid protozoa

TL;DR: The results provide no evidence for co-evolution of trypanosomatids and their hosts, either vertebrate or invertebrate, which suggests that evolution of try panosom atids was accompanied by secondary acquisitions of hosts and habitats.
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