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Population genetic structure of the perlemoen Haliotis midae in South Africa: evidence of range expansion and founder events

TLDR
It is concluded that populations of H. midae on either side of Cape Agulhas represent 2 independent reproductive stocks, and the area of transition between the stocks coincides with oceanographic features of the region.
Abstract
Genetic diversity in Haliotis midae, a highly valued and heavily exploited marine gastropod, was assessed using 3 marker types across samples from the species' range in South Africa. Variation was compared at 7 allozyme loci, 2 regions of mitochondrial DNA and 3 microsatellite loci. We conclude that populations of H. midae on either side of Cape Agulhas represent 2 independent reproductive stocks. The area of transition between the stocks coincides with oceanographic features of the region. Evidence from all 3 types of genetic marker indicates an isolated introduction event to the east of Cape Agulhas, and subsequent range expansion in an easterly direction. The disparity between allozyme data and the other 2 forms is seen as further evidence for the presence of balanc- ing selection at allozyme loci.

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Journal ArticleDOI

Significant population structure and asymmetric gene flow patterns amidst expanding populations of Clinus cottoides (Perciformes, Clinidae): application of molecular data to marine conservation planning in South Africa

TL;DR: Neutrality tests and mismatch distributions suggest recent population expansions, with the exception of peripheral western and eastern populations (possibly a consequence of environmental extremes at the edge of the species distribution).
Journal ArticleDOI

Mitochondrial DNA Sequence and Gene Organization in the Australian Blacklip Abalone Haliotis rubra (Leach)

TL;DR: The complete mitochondrial DNA of the blacklip abalone Haliotis rubra was cloned and 16,907 base pairs were sequenced, and sequences from the ATP8, NAD2, NAD4L, NAD6, and 12S rRNA genes, as well as the control region, are the most variable among representatives from Mollusca, Arthropoda, and Rhynchonelliformea.
Journal ArticleDOI

Range‐wide genetic homogeneity in the California sea mussel (Mytilus californianus): a comparison of allozymes, nuclear DNA markers, and mitochondrial DNA sequences

TL;DR: The genetic uniformity exhibited by M. californianus may result from a combination of extensive gene flow and the lack of exposure to strong selective gradients across its range, which is different from similar studies on other mytilids.
Journal ArticleDOI

Zoogeography of intertidal communities in the West Indian Ocean as determined by ocean circulation systems: patterns from the Tetraclita barnacles.

TL;DR: The hypothesis that the distribution and connectivity of intertidal animals in the WIO are determined by the major oceanographic regime but less influenced by historical events such as Pleistocene glaciations is supported.
Journal ArticleDOI

Historical isolation and hydrodynamically constrained gene flow in declining populations of the South-African abalone, Haliotis midae

TL;DR: In this paper, eight microsatellites and 12 single nucleotide polymorphic loci (SNPs) were applied to determine genetic structure in nine populations sampled throughout the species' natural distribution range.
References
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Journal ArticleDOI

Estimating F-statistics for the analysis of population structure.

TL;DR: The purpose of this discussion is to offer some unity to various estimation formulae and to point out that correlations of genes in structured populations, with which F-statistics are concerned, are expressed very conveniently with a set of parameters treated by Cockerham (1 969, 1973).
Book

Molecular Evolutionary Genetics

Masatoshi Nei
TL;DR: Recent developments of statistical methods in molecular phylogenetics are reviewed and it is shown that the mathematical foundations of these methods are not well established, but computer simulations and empirical data indicate that currently used methods produce reasonably good phylogenetic trees when a sufficiently large number of nucleotides or amino acids are used.
Journal ArticleDOI

Genetic distance between populations

TL;DR: If enough data are available, genetic distance between any pair of organisms can be measured in terms of D, and this measure is applicable to any kind of organism without regard to ploidy or mating scheme.
Book

Molecular Markers, Natural History, and Evolution

John C. Avise
TL;DR: A history of Molecular Phylogenetics and applications of individuality and Parentage, issues of Heterozygosity, and special Approaches to Phylageny Estimation are reviewed.
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