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Role of the KNAT7 transcription factor in diurnal regulation of lignin biosynthetic genes and resource allocation in Arabidopsis thaliana
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Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes
Jo Vandesompele,Katleen De Preter,Filip Pattyn,Bruce Poppe,Nadine Van Roy,Anne De Paepe,Franki Speleman +6 more
TL;DR: The normalization strategy presented here is a prerequisite for accurate RT-PCR expression profiling, which opens up the possibility of studying the biological relevance of small expression differences.
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An “Electronic Fluorescent Pictograph” Browser for Exploring and Analyzing Large-Scale Biological Data Sets
TL;DR: The eFP Browser software is easily adaptable to microarray or other large-scale data sets from any organism and thus should prove useful to a wide community for visualizing and interpreting these data sets for hypothesis generation.
Journal ArticleDOI
Orchestrated Transcription of Key Pathways in Arabidopsis by the Circadian Clock
Stacey L. Harmer,John B. Hogenesch,Marty Straume,Hur-Song Chang,Bin Han,Tong Zhu,Xun Wang,Joel A. Kreps,Steve A. Kay,Steve A. Kay +9 more
TL;DR: This study presents a comprehensive view of the temporal compartmentalization of physiological pathways by the circadian clock in a eukaryote.
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Reciprocal Regulation Between TOC1 and LHY/CCA1 Within the Arabidopsis Circadian Clock
TL;DR: It is shown that both proteins bind to a region in the TOC1 promoter that is critical for its clock regulation, and these interactions form a loop critical for clock function inArabidopsis.
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Transcription switches for protoxylem and metaxylem vessel formation
Minoru Kubo,Makiko Udagawa,Nobuyuki Nishikubo,Gorou Horiguchi,Masatoshi Yamaguchi,Jun Ito,Tetsuro Mimura,Hiroo Fukuda,Taku Demura +8 more
TL;DR: Findings suggest that VND6 and VND7 genes are transcription switches for plant metaxylem and protoxylem vessel formation.