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Unsupervised Anomaly Detection with Generative Adversarial Networks to Guide Marker Discovery

TLDR
AnoGAN as discussed by the authors uses a deep convolutional generative adversarial network to learn a manifold of normal anatomical variability, accompanying a novel anomaly scoring scheme based on the mapping from image space to a latent space.
Abstract
Obtaining models that capture imaging markers relevant for disease progression and treatment monitoring is challenging. Models are typically based on large amounts of data with annotated examples of known markers aiming at automating detection. High annotation effort and the limitation to a vocabulary of known markers limit the power of such approaches. Here, we perform unsupervised learning to identify anomalies in imaging data as candidates for markers. We propose AnoGAN, a deep convolutional generative adversarial network to learn a manifold of normal anatomical variability, accompanying a novel anomaly scoring scheme based on the mapping from image space to a latent space. Applied to new data, the model labels anomalies, and scores image patches indicating their fit into the learned distribution. Results on optical coherence tomography images of the retina demonstrate that the approach correctly identifies anomalous images, such as images containing retinal fluid or hyperreflective foci.

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Citations
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Journal ArticleDOI

GAN-based synthetic medical image augmentation for increased CNN performance in liver lesion classification

TL;DR: It is shown that generated medical images can be used for synthetic data augmentation, and improve the performance of CNN for medical image classification, and generalize to other medical classification applications and thus support radiologists’ efforts to improve diagnosis.
Journal ArticleDOI

f-AnoGAN: Fast unsupervised anomaly detection with generative adversarial networks.

TL;DR: Fast AnoGAN (f‐AnoGAN), a generative adversarial network (GAN) based unsupervised learning approach capable of identifying anomalous images and image segments, that can serve as imaging biomarker candidates is presented.
Journal ArticleDOI

Not-so-supervised: A survey of semi-supervised, multi-instance, and transfer learning in medical image analysis

TL;DR: In this article, a survey of semi-supervised, multiple instance and transfer learning in medical image segmentation is presented, and connections between these learning scenarios, and opportunities for future research are discussed.
Posted Content

MAD-GAN: Multivariate Anomaly Detection for Time Series Data with Generative Adversarial Networks

TL;DR: The proposed MAD-GAN framework considers the entire variable set concurrently to capture the latent interactions amongst the variables and is effective in reporting anomalies caused by various cyber-intrusions compared in these complex real-world systems.
Journal ArticleDOI

Artificial intelligence in retina.

TL;DR: In this paper, a fully automated AI-based system has been proposed for screening of diabetic retinopathy (DR) in diabetic macular and retinal disease using a convolutional neural network.
References
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Proceedings Article

Adam: A Method for Stochastic Optimization

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Generative Adversarial Nets

TL;DR: A new framework for estimating generative models via an adversarial process, in which two models are simultaneously train: a generative model G that captures the data distribution and a discriminative model D that estimates the probability that a sample came from the training data rather than G.
Posted Content

Unsupervised Representation Learning with Deep Convolutional Generative Adversarial Networks

TL;DR: This work introduces a class of CNNs called deep convolutional generative adversarial networks (DCGANs), that have certain architectural constraints, and demonstrates that they are a strong candidate for unsupervised learning.
Proceedings ArticleDOI

Context Encoders: Feature Learning by Inpainting

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Proceedings Article

Improved techniques for training GANs

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