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Aleksandra Jurek
Researcher at Royal Institute of Technology
Publications - 12
Citations - 951
Aleksandra Jurek is an academic researcher from Royal Institute of Technology. The author has contributed to research in topics: Computer science & Alzheimer's disease. The author has an hindex of 7, co-authored 9 publications receiving 309 citations.
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Journal ArticleDOI
Spatial Transcriptomics and In Situ Sequencing to Study Alzheimer's Disease.
Wei Ting Chen,Wei Ting Chen,Ashley Lu,Ashley Lu,Katleen Craessaerts,Katleen Craessaerts,Benjamin Pavie,Carlo Sala Frigerio,Carlo Sala Frigerio,Carlo Sala Frigerio,Nikky Corthout,Xiaoyan Qian,Jana Lalakova,Malte Kühnemund,Iryna Voytyuk,Iryna Voytyuk,Leen Wolfs,Leen Wolfs,Renzo Mancuso,Renzo Mancuso,Evgenia Salta,Evgenia Salta,Sriram Balusu,Sriram Balusu,An Snellinx,An Snellinx,Sebastian Munck,Aleksandra Jurek,José Fernández Navarro,Takaomi C. Saido,Inge Huitinga,Inge Huitinga,Joakim Lundeberg,Mark Fiers,Mark Fiers,Mark Fiers,Bart De Strooper,Bart De Strooper,Bart De Strooper +38 more
TL;DR: Genome-wide spatial transcriptomics analysis provides an unprecedented approach to untangle the dysregulated cellular network in the vicinity of pathogenic hallmarks of AD and other brain diseases.
Journal ArticleDOI
Single-cell and spatial transcriptomics enables probabilistic inference of cell type topography.
Alma Andersson,Joseph Bergenstråhle,Michaela Asp,Ludvig Bergenstråhle,Aleksandra Jurek,José Fernández Navarro,Joakim Lundeberg +6 more
TL;DR: A probabilistic framework is presented that integrates single-cell and bulk spatial transcriptomics in order to spatially map cell types onto their respective tissues and applies to the developing human heart and mouse brain to demonstrate the power of the technique.
Journal ArticleDOI
Molecular atlas of the adult mouse brain.
Cantin Ortiz,José Fernández Navarro,Aleksandra Jurek,Antje Märtin,Joakim Lundeberg,Konstantinos Meletis +5 more
TL;DR: A molecular atlas is established to formally define the spatial organization of brain regions, including the molecular code for mapping and targeting of discrete neuroanatomical domains, and provides a resource for annotating the brain using a minimal gene set—a brain palette.
Posted ContentDOI
Molecular Atlas of the Adult Mouse Brain
Cantin Ortiz,José Fernández Navarro,Aleksandra Jurek,Antje Märtin,Joakim Lundeberg,Konstantinos Meletis +5 more
TL;DR: A new molecular atlas is established to formally define the identity of brain regions, and a molecular code for mapping and targeting of discrete neuroanatomical domains is established.
Journal ArticleDOI
Spatial Transcriptomics Reveals Genes Associated with Dysregulated Mitochondrial Functions and Stress Signaling in Alzheimer Disease.
José Fernández Navarro,Deborah L. Croteau,Aleksandra Jurek,Zaneta Andrusivova,Beimeng Yang,Yue Wang,Benjamin Ogedegbe,Tahira Riaz,Mari Støen,Claus Desler,Lene Juel Rasmussen,Tone Tønjum,Marie-Christine Galas,Joakim Lundeberg,Vilhelm A. Bohr,Vilhelm A. Bohr +15 more
TL;DR: A rich resource of spatially differentially expressed genes may contribute to understanding AD pathology and identify Bok, implicated in mitochondrial physiology and cell death, as a spatially downregulated gene in the hippocampus of mouse and human AD brains.