D
Donald Bovee
Researcher at University of Washington
Publications - 8
Citations - 2572
Donald Bovee is an academic researcher from University of Washington. The author has contributed to research in topics: Genome & Gene. The author has an hindex of 7, co-authored 8 publications receiving 2438 citations.
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Journal ArticleDOI
Comprehensive transposon mutant library of Pseudomonas aeruginosa.
Michael A. Jacobs,Ashley Alwood,Iyarit Thaipisuttikul,David H. Spencer,Eric Haugen,Stephen Ernst,Oliver Will,Rajinder Kaul,Christopher K. Raymond,Ruth Levy,Liu Chun-Rong,Donald Guenthner,Donald Bovee,Maynard V. Olson,Colin Manoil +14 more
TL;DR: P phenotypic analysis of the collection may produce essentially complete lists of genes required for diverse biological activities, as well as facilitate downstream studies of gene expression, protein localization, epistasis, and chromosome engineering.
Journal ArticleDOI
The Genome of the Natural Genetic Engineer Agrobacterium tumefaciens C58
Derek W. Wood,João C. Setubal,Rajinder Kaul,Dave E. Monks,João Paulo Kitajima,Vagner K. Okura,Yang Zhou,Lishan Chen,Gwendolyn E. Wood,Nalvo F. Almeida,Lisa Woo,Yuching Chen,Ian T. Paulsen,Jonathan A. Eisen,Peter D. Karp,Donald Bovee,Peter Chapman,James B. Clendenning,Glenda Deatherage,Will Gillet,Charles E. Grant,Tatyana Kutyavin,Ruth Levy,Meng-Jin Li,Erin K. McClelland,Anthony Palmieri,Christopher K. Raymond,Gregory Rouse,Channakhone Saenphimmachak,Zaining Wu,Pedro Romero,David E. Gordon,Shiping Zhang,Heayun Yoo,Yumin Tao,Phyllis Biddle,Mark Timothy Jung,William Krespan,Michael Perry,Bill Gordon-Kamm,Li Liao,Sun Kim,Carol A. Hendrick,Zuo-Yu Zhao,Maureen Dolan,Forrest Chumley,Scott V. Tingey,Jean-Francois Tomb,Milton P. Gordon,Maynard V. Olson,Eugene W. Nester +50 more
TL;DR: The 5.67-megabase genome of the plant pathogen Agrobacterium tumefaciens C58 consists of a circular chromosome, a linear chromosome, and two plasmids that suggest a recent evolutionary divergence.
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Comparison of Francisella tularensis genomes reveals evolutionary events associated with the emergence of human pathogenic strains
Laurence Rohmer,Christine Fong,Simone Abmayr,Michael Wasnick,Theodore J. Larson Freeman,Matthew C. Radey,Tina Guina,Kerstin Svensson,Kerstin Svensson,Hillary S. Hayden,Michael A. Jacobs,Larry A. Gallagher,Colin Manoil,Robert K. Ernst,Becky Drees,Danielle Buckley,Eric Haugen,Donald Bovee,Yang Zhou,Jean Chang,Ruth Levy,Regina Lim,Will Gillett,Don Guenthener,Allison Kang,Scott A. Shaffer,Greg K. Taylor,Jinzhi Chen,Byron Gallis,David A. D'Argenio,Mats Forsman,Maynard V. Olson,David R. Goodlett,Rajinder Kaul,Samuel I. Miller,Mitchell J. Brittnacher +35 more
TL;DR: The chronology of events suggests a substantial role for genetic drift in the formation of pseudogenes in Francisella genomes, which may be shared by pathogens from other species.
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Complete Genome Sequence of the Genetically Tractable Hydrogenotrophic Methanogen Methanococcus maripaludis
Erik L. Hendrickson,Rajinder Kaul,Yang Zhou,Donald Bovee,Peter Chapman,J. Chung,E. Conway de Macario,J. A. Dodsworth,Will Gillett,David E. Graham,Murray Hackett,Andrew Haydock,Allison Kang,Miriam Land,Ruth Levy,Thomas J. Lie,Tiffany A. Major,Brian C. Moore,Iris Porat,A. Palmeiri,Greg W. Rouse,Channakhone Saenphimmachak,Dieter Söll,S. Van Dien,Tiansong Wang,William B. Whitman,Qiangwei Xia,Yaoping Zhang,Frank W. Larimer,Maynard V. Olson,John A. Leigh +30 more
TL;DR: The genome sequence of the genetically tractable, mesophilic, hydrogenotrophic methanogen Methanococcus maripaludis contains 1,722 protein-coding genes in a single circular chromosome of 1,661,137 bp, which explained the ability of the organism to use L- and D-alanine as nitrogen sources.
Journal ArticleDOI
Scan of human genome reveals no new Loci under ancient balancing selection.
Kerry L. Bubb,Donald Bovee,Danielle Buckley,Eric Haugen,M. Kibukawa,Marcia Paddock,Anthony Palmieri,Sandhya Subramanian,Yang Zhou,Rajinder Kaul,Philip Green,Maynard V. Olson +11 more
TL;DR: It is proposed that because it is rarely stable, long-term balancing selection is an evolutionary oddity, and when a balanced polymorphism is ancient in origin, the requirements for detection by means of SNP data alone will rarely be met.