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Nalvo F. Almeida
Researcher at Federal University of Mato Grosso do Sul
Publications - 69
Citations - 4939
Nalvo F. Almeida is an academic researcher from Federal University of Mato Grosso do Sul. The author has contributed to research in topics: Genome & Gene. The author has an hindex of 24, co-authored 67 publications receiving 4548 citations. Previous affiliations of Nalvo F. Almeida include Virginia Tech & Virginia Bioinformatics Institute.
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Journal ArticleDOI
Comparison of the genomes of two Xanthomonas pathogens with differing host specificities
A.C.R. da Silva,Jesus Aparecido Ferro,Fernando C. Reinach,Chuck S. Farah,Luiz Roberto Furlan,Ronaldo Bento Quaggio,Claudia Barros Monteiro-Vitorello,M. A. Van Sluys,Nalvo F. Almeida,Lucia Maria Carareto Alves,A. M. do Amaral,Maria Célia Bertolini,Luis Eduardo Aranha Camargo,Giovana Camarotte,Fabiana de Souza Cannavan,Cardozo Jc,Felipe S. Chambergo,L. P. Ciapina,Regina Maria Barretto Cicarelli,Luiz Lehmann Coutinho,Jeny R. Cursino-Santos,Hamza El-Dorry,J. B. Faria,Ari J. S. Ferreira,Rita de Cássia Café Ferreira,Maria Inês Tiraboschi Ferro,Eduardo Fernandes Formighieri,Marília Caixeta Franco,Christian C. Greggio,Arthur Gruber,Angela M. Katsuyama,Luciano Takeshi Kishi,Rui P. Leite,Eliana Gertrudes de Macedo Lemos,Manoel Victor Franco Lemos,E. C. Locali,Marcos Antonio Machado,Alda Maria Backx Noronha Madeira,Nilce Maria Martinez-Rossi,E. C. Martins,João Meidanis,Carlos Frederico Martins Menck,Cristina Yumi Miyaki,D. H. Moon,Leandro Marcio Moreira,M. T. M. Novo,Vagner K. Okura,Mariana Cabral de Oliveira,V. R. Oliveira,H. A. Pereira,Antonio Rossi,Janete Apparecida Desidério Sena,Cícero Lopes da Silva,R. F. B. de Souza,L. A. F. Spinola,Marco Aurélio Takita,Rodrigo Esaki Tamura,E. C. Teixeira,R. I. D. Tezza,M. Trindade dos Santos,Daniela Truffi,Siu Mui Tsai,Frank F. White,Frank F. White,João C. Setubal,João Paulo Kitajima +65 more
TL;DR: The genus Xanthomonas is a diverse and economically important group of bacterial phytopathogens, belonging to the γ-subdivision of the Proteobacteria, and several groups of strain-specific genes are identified and proposed mechanisms that may explain the differing host specificities and pathogenic processes are proposed.
Journal ArticleDOI
The Genome of the Natural Genetic Engineer Agrobacterium tumefaciens C58
Derek W. Wood,João C. Setubal,Rajinder Kaul,Dave E. Monks,João Paulo Kitajima,Vagner K. Okura,Yang Zhou,Lishan Chen,Gwendolyn E. Wood,Nalvo F. Almeida,Lisa Woo,Yuching Chen,Ian T. Paulsen,Jonathan A. Eisen,Peter D. Karp,Donald Bovee,Peter Chapman,James B. Clendenning,Glenda Deatherage,Will Gillet,Charles E. Grant,Tatyana Kutyavin,Ruth Levy,Meng-Jin Li,Erin K. McClelland,Anthony Palmieri,Christopher K. Raymond,Gregory Rouse,Channakhone Saenphimmachak,Zaining Wu,Pedro Romero,David E. Gordon,Shiping Zhang,Heayun Yoo,Yumin Tao,Phyllis Biddle,Mark Timothy Jung,William Krespan,Michael Perry,Bill Gordon-Kamm,Li Liao,Sun Kim,Carol A. Hendrick,Zuo-Yu Zhao,Maureen Dolan,Forrest Chumley,Scott V. Tingey,Jean-Francois Tomb,Milton P. Gordon,Maynard V. Olson,Eugene W. Nester +50 more
TL;DR: The 5.67-megabase genome of the plant pathogen Agrobacterium tumefaciens C58 consists of a circular chromosome, a linear chromosome, and two plasmids that suggest a recent evolutionary divergence.
Journal ArticleDOI
Comparative analyses of the complete genome sequences of Pierce's disease and citrus variegated chlorosis strains of Xylella fastidiosa
M. A. Van Sluys,M. C. de Oliveira,Claudia Barros Monteiro-Vitorello,Cristina Yumi Miyaki,Luiz Roberto Furlan,Luis Eduardo Aranha Camargo,A.C.R. da Silva,D. H. Moon,Marco Aurélio Takita,Eliana Gertrudes de Macedo Lemos,Marco Antonio Machado,Maria Inês Tiraboschi Ferro,F. R. da Silva,Maria Helena S. Goldman,Gustavo H. Goldman,Manoel Victor Franco Lemos,Hamza El-Dorry,Siu Mui Tsai,Helaine Carrer,Dirce Maria Carraro,R. C. de Oliveira,Luiz R. Nunes,Walter José Siqueira,Luiz Lehmann Coutinho,Edna Teruko Kimura,Emer S. Ferro,Ricardo Harakava,Eiko E. Kuramae,Celso Luis Marino,E. A. Giglioti,I. L. Abreu,Lucia Maria Carareto Alves,A. M. do Amaral,Gilson S. Baia,S. R. Blanco,Michael dos Santos Brito,Fabiana de Souza Cannavan,A. V. Celestino,A. F. Da Cunha,Roseli C. Fenille,Jesus Aparecido Ferro,Eduardo Fernandes Formighieri,Luciano Takeshi Kishi,S. G. Leoni,A. R. Oliveira,Vicente E. De Rosa,F. T. Sassaki,Janete Apparecida Desidério Sena,A. A. de Souza,Daniela Truffi,Fernando Tsukumo,Giane M. Yanai,Lilian Giotto Zaros,Edwin L. Civerolo,Andrew J. G. Simpson,Nalvo F. Almeida,João C. Setubal,João Paulo Kitajima +57 more
TL;DR: The genome sequence of X. fastidiosa (Temecula strain) is reported and it is concluded that these two organisms have identical metabolic functions and are likely to use a common set of genes in plant colonization and pathogenesis, permitting convergence of functional genomic strategies.
Journal ArticleDOI
Genome Sequence of Azotobacter vinelandii, an Obligate Aerobe Specialized To Support Diverse Anaerobic Metabolic Processes
João C. Setubal,Patricia C. Dos Santos,Barry S. Goldman,Helga Ertesvåg,Guadelupe Espin,Luis M. Rubio,Svein Valla,Nalvo F. Almeida,Divya Balasubramanian,Lindsey Cromes,Leonardo Curatti,Zijin Du,Eric J. Godsy,Brad Goodner,Kaitlyn Hellner-Burris,Jose A. Hernandez,Katherine Houmiel,Juan Imperial,Christina Kennedy,Timothy J. Larson,Phil Latreille,Lauren S. Ligon,Jing Lu,Mali Mærk,Nancy M. Miller,Stacie Norton,Ina P. O'Carroll,Ian T. Paulsen,Estella C. Raulfs,Rebecca Roemer,James M. Rosser,Daniel Segura,Steve Slater,Shawn L. Stricklin,David J. Studholme,Jian Sun,Carlos Juliano M. Viana,Erik Wallin,Baomin Wang,Cathy Wheeler,Huijun Zhu,Dennis R. Dean,Ray Dixon,Derek W. Wood,Derek W. Wood +44 more
TL;DR: The complete genome sequence of A. vinelandii DJ is reported, which identified the chromosomal locations of the genes coding for the three known oxygen-sensitive nitrogenases, as well as genes codes for other oxygen- sensitive enzymes, such as carbon monoxide dehydrogenase and formate dehydrogen enzyme.
Journal ArticleDOI
Genome Sequences of Three Agrobacterium Biovars Help Elucidate the Evolution of Multichromosome Genomes in Bacteria
Steven C. Slater,Barry S. Goldman,Brad Goodner,João C. Setubal,Stephen K. Farrand,Eugene W. Nester,Thomas J. Burr,Lois M. Banta,Allan W. Dickerman,Ian T. Paulsen,Leon Otten,Garret Suen,Roy D. Welch,Nalvo F. Almeida,Nalvo F. Almeida,Frank Arnold,Oliver T. Burton,Zijin Du,Adam D. Ewing,Eric J. Godsy,Sara E. Heisel,Kathryn L. Houmiel,Kathryn L. Houmiel,Jinal Jhaveri,Jing Lu,Nancy M. Miller,Stacie Norton,Qiang Chen,Waranyoo Phoolcharoen,Victoria Ohlin,Dan Ondrusek,Nicole Pride,Shawn L. Stricklin,Jian Sun,Jian Sun,Cathy Wheeler,Cathy Wheeler,Lindsey Wilson,Huijun Zhu,Derek W. Wood,Derek W. Wood +40 more
TL;DR: Together, these results define the evolution of chromosome architecture and gene content among the Rhizobiaceae and support a generalized mechanism for second-chromosome formation among bacteria.