G
Gavin Sherlock
Researcher at Stanford University
Publications - 177
Citations - 98574
Gavin Sherlock is an academic researcher from Stanford University. The author has contributed to research in topics: Gene & Population. The author has an hindex of 71, co-authored 164 publications receiving 88897 citations. Previous affiliations of Gavin Sherlock include University of Southern California & University of California, Berkeley.
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The Aspergillus Genome Database, a curated comparative genomics resource for gene, protein and sequence information for the Aspergillus research community
Martha B. Arnaud,Marcus C. Chibucos,Maria C. Costanzo,Jonathan Crabtree,Diane O. Inglis,Adil Lotia,Joshua Orvis,Prachi Shah,Marek S. Skrzypek,Gail Binkley,Stuart R. Miyasato,Jennifer R. Wortman,Gavin Sherlock +12 more
TL;DR: The AspGD combines high-quality manual curation of the experimental scientific literature examining the genetics and molecular biology of Aspergilli, cutting-edge comparative genomics approaches to iteratively refine and improve structural gene annotations across multiple As pergillus species, and web-based research tools for accessing and exploring the data.
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Implementation of GenePattern within the Stanford Microarray Database
Jeremy Hubble,Janos Demeter,Heng Jin,Maria Mao,Michael Nitzberg,T. B. K. Reddy,Farrell Wymore,Zachariah K. Zachariah,Gavin Sherlock,Catherine A. Ball +9 more
TL;DR: The GenePattern software package is incorporated directly into SMD, providing access to many new analysis tools, as well as a plug-in architecture that allows users to directly integrate and share additional tools through SMD.
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The Candida Genome Database (CGD), a community resource for Candida albicans gene and protein information
Martha B. Arnaud,Maria C. Costanzo,Marek S. Skrzypek,Gail Binkley,Christopher Lane,Stuart R. Miyasato,Gavin Sherlock +6 more
TL;DR: The Candida Genome Database (CGD) is a new database that contains genomic information about the opportunistic fungal pathogen Candida albicans and provides community resources, including a reservation system for gene names and a colleague registry through which Candida researchers can share contact information and research interests.
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TB database 2010: overview and update.
James E. Galagan,James E. Galagan,Peter Sisk,Christian Stolte,Brian Weiner,Michael Koehrsen,Farrell Wymore,T. B. K. Reddy,Jeremy Zucker,Reinhard Engels,Marcel Gellesch,Jeremy Hubble,Heng Jin,Lisa Larson,Maria Mao,Michael Nitzberg,Jared White,Zachariah K. Zachariah,Gavin Sherlock,Catherine A. Ball,Gary K. Schoolnik +20 more
TL;DR: An overview of TBDB is provided, focusing on the recent release of a Global Genetic Diversity dataset for TB, support for short-read re-sequencing data, new tools for exploring gene expression data in the context of gene regulation, and the integration of a metabolic network reconstruction and BioCyc with TBDB.
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The Longhorn Array Database (LAD): an open-source, MIAME compliant implementation of the Stanford Microarray Database (SMD).
TL;DR: The development of LAD provides a simple, free, open, reliable and proven solution for storage and analysis of two-color microarray data.