H
Hans A. Vasquez-Gross
Researcher at University of California, Davis
Publications - 14
Citations - 1687
Hans A. Vasquez-Gross is an academic researcher from University of California, Davis. The author has contributed to research in topics: Gene & Genome. The author has an hindex of 9, co-authored 14 publications receiving 1333 citations. Previous affiliations of Hans A. Vasquez-Gross include University of California & University of Connecticut.
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Journal ArticleDOI
Uncovering hidden variation in polyploid wheat.
Ksenia V. Krasileva,Ksenia V. Krasileva,Ksenia V. Krasileva,Hans A. Vasquez-Gross,Tyson Howell,Paul Bailey,Francine Paraiso,Leah Clissold,James Simmonds,Ricardo H. Ramirez-Gonzalez,Xiaodong Wang,Philippa Borrill,Christine Fosker,Sarah Ayling,Andrew L. Phillips,Cristobal Uauy,Jorge Dubcovsky,Jorge Dubcovsky +17 more
TL;DR: The protein coding regions of 2,735 mutant lines of tetraploid and hexaploid wheat were sequenced and a public database including more than 10 million mutations was developed, enabling rapid identification of mutations in the different copies of the wheat genes.
Journal ArticleDOI
Decoding the massive genome of loblolly pine using haploid DNA and novel assembly strategies
David B. Neale,Jill L. Wegrzyn,Kristian Stevens,Aleksey V. Zimin,Daniela Puiu,Marc W. Crepeau,Charis Cardeno,Maxim Koriabine,Ann E. Holtz-Morris,John D. Liechty,Pedro J. Martínez-García,Hans A. Vasquez-Gross,Brian Y. Lin,Jacob J. Zieve,William M. Dougherty,Sara Fuentes-Soriano,Le-Shin Wu,Don Gilbert,Guillaume Marçais,Michael Roberts,Carson Holt,Mark Yandell,John M. Davis,Katherine E. Smith,Jeffrey F. D. Dean,W. Walter Lorenz,Ross W. Whetten,Ronald R. Sederoff,Nicholas C. Wheeler,Patrick E. McGuire,Doreen Main,Carol A. Loopstra,Keithanne Mockaitis,Pieter J. deJong,James A. Yorke,Steven L. Salzberg,Charles H. Langley +36 more
TL;DR: In this paper, the authors used a whole genome shotgun approach relying on next generation sequence generated from a single haploid seed megagametophyte from a loblolly pine tree, 20-1010, that has been used in industrial forest tree breeding.
Journal ArticleDOI
Efficient Genome-Wide Detection and Cataloging of EMS-Induced Mutations Using Exome Capture and Next-Generation Sequencing
Isabelle M. Henry,Ugrappa Nagalakshmi,Meric Lieberman,Kathie J. Ngo,Ksenia V. Krasileva,Hans A. Vasquez-Gross,Alina Akhunova,Eduard Akhunov,Jorge Dubcovsky,Jorge Dubcovsky,Thomas H. Tai,Luca Comai +11 more
TL;DR: The authors combined high-throughput global sequencing targeted to genes and custom-designed bioinformatics tools to catalog and characterize chemically induced mutations in rice and wheat to provide a method for developing large-scale induced mutation resources with relatively small investments that is applicable to resource-poor organisms.
Journal ArticleDOI
Unique Features of the Loblolly Pine (Pinus Taeda L.) Megagenome Revealed through Sequence Annotation
Jill L. Wegrzyn,John D. Liechty,Kristian Stevens,Le-Shin Wu,Carol A. Loopstra,Hans A. Vasquez-Gross,William M. Dougherty,Brian Y. Lin,Jacob J. Zieve,Pedro J. Martínez-García,Carson Holt,Mark Yandell,Aleksey V. Zimin,James A. Yorke,Marc W. Crepeau,Daniela Puiu,Steven L. Salzberg,Pieter J. de Jong,Keithanne Mockaitis,Doreen Main,Charles H. Langley,David B. Neale +21 more
TL;DR: The first whole-genome shotgun assembly of loblolly pine (Pinus taeda L.), which comprises 20.1 Gb of sequence is presented, and in depth analysis of the tandem and interspersed repetitive content yielded a combined estimate of 82%.
Journal ArticleDOI
The walnut (Juglans regia) genome sequence reveals diversity in genes coding for the biosynthesis of non-structural polyphenols
Pedro J. Martínez-García,Marc W. Crepeau,Daniela Puiu,Daniel Gonzalez-Ibeas,Jeanne Whalen,Kristian Stevens,Robin Paul,Timothy Butterfield,Monica Britton,Russell L. Reagan,Sandeep Chakraborty,Sriema L. Walawage,Hans A. Vasquez-Gross,Charis Cardeno,Randi A. Famula,Kevin Pratt,Sowmya Kuruganti,Mallikarjuna K. Aradhya,Charles A. Leslie,Abhaya M. Dandekar,Steven L. Salzberg,Jill L. Wegrzyn,Charles H. Langley,David B. Neale +23 more
TL;DR: The walnut genome sequence provides important tools and methods to accelerate breeding and to facilitate the genetic dissection of complex traits, and provides meaningful insight into the complex pathways required for the synthesis of polyphenols.