H
Hongjian Qi
Researcher at Columbia University
Publications - 20
Citations - 1725
Hongjian Qi is an academic researcher from Columbia University. The author has contributed to research in topics: Exome sequencing & Exome. The author has an hindex of 11, co-authored 19 publications receiving 1144 citations. Previous affiliations of Hongjian Qi include Columbia University Medical Center & Cincinnati Children's Hospital Medical Center.
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Journal ArticleDOI
De novo mutations in congenital heart disease with neurodevelopmental and other congenital anomalies.
Jason Homsy,Samir Zaidi,Yufeng Shen,James S. Ware,James S. Ware,James S. Ware,Kaitlin E. Samocha,Konrad J. Karczewski,Steven R. DePalma,Steven R. DePalma,David M. McKean,Hiroko Wakimoto,Josh Gorham,Sheng Chih Jin,John E. Deanfield,Alessandro Giardini,George A. Porter,Richard B. Kim,Kaya Bilguvar,Francesc López-Giráldez,Irina Tikhonova,Shrikant Mane,Angela Romano-Adesman,Hongjian Qi,Hongjian Qi,Badri N. Vardarajan,Lijiang Ma,Mark J. Daly,Amy E. Roberts,Mark W. Russell,Seema Mital,Jane W. Newburger,J. William Gaynor,Roger E. Breitbart,Ivan Iossifov,Michael Ronemus,Stephen Sanders,Jonathan R. Kaltman,Jonathan G. Seidman,Martina Brueckner,Bruce D. Gelb,Elizabeth Goldmuntz,Elizabeth Goldmuntz,Richard P. Lifton,Richard P. Lifton,Christine E. Seidman,Christine E. Seidman,Christine E. Seidman,Wendy K. Chung +48 more
TL;DR: Clinical genotyping of patients with CHD may help to identify those at greatest risk of neurodevelopmental disabilities, allowing surveillance and early intervention and provide opportunities for improved prognostic assessment and early therapeutic intervention in CHD patients.
Journal ArticleDOI
Contribution of rare inherited and de novo variants in 2,871 congenital heart disease probands
Sheng Chih Jin,Jason Homsy,Samir Zaidi,Qiongshi Lu,Sarah U. Morton,Steven R. DePalma,Xue Zeng,Hongjian Qi,Weni Chang,Michael C. Sierant,Wei Chien Hung,Shozeb Haider,Junhui Zhang,James R. Knight,Robert D. Bjornson,Christopher Castaldi,Irina R. Tikhonoa,Kaya Bilguvar,Shrikant Mane,Stephen Sanders,Seema Mital,Mark W. Russell,J. William Gaynor,John E. Deanfield,Alessandro Giardini,George A. Porter,Deepak Srivastava,Cecelia W. Lo,Yufeng Shen,W. Scott Watkins,Mark Yandell,H. Joseph Yost,Martin Tristani-Firouzi,Jane W. Newburger,Amy E. Roberts,Richard B. Kim,Hongyu Zhao,Jonathan R. Kaltman,Elizabeth Goldmuntz,Wendy K. Chung,Jonathan G. Seidman,Bruce D. Gelb,Christine E. Seidman,Richard P. Lifton,Richard P. Lifton,Martina Brueckner +45 more
TL;DR: Exome sequencing of a single cohort of 2,871 CHD probands, including 2,645 parent–offspring trios, implicated rare inherited mutations in 1.8%, and DNMs in ∼440 genes were inferred to contribute to CHD.
Journal ArticleDOI
Exome Sequencing in Children With Pulmonary Arterial Hypertension Demonstrates Differences Compared With Adults
Na Zhu,Claudia Gonzaga-Jauregui,Carrie L. Welch,Lijiang Ma,Hongjian Qi,Alejandra King,Usha Krishnan,Erika B. Rosenzweig,D. Dunbar Ivy,Eric D. Austin,Rizwan Hamid,William C. Nichols,Michael W. Pauciulo,Katie A. Lutz,Ashley Sawle,Jeffrey G. Reid,John D. Overton,Aris Baras,Frederick E. Dewey,Yufeng Shen,Wendy K. Chung +20 more
TL;DR: Exome sequencing revealed a 2-fold enrichment of de novo likely gene-damaging and predicted deleterious missense variants among pediatric IPAH patients without mutations in known risk genes, which may explain ≈19% of pediatric-onset IPAH cases.
Journal ArticleDOI
Genomic analyses implicate noncoding de novo variants in congenital heart disease.
Felix Richter,Sarah U. Morton,Seong Won Kim,Alexander Kitaygorodsky,Lauren K. Wasson,Kathleen M. Chen,Jian Zhou,Jian Zhou,Hongjian Qi,Nihir Patel,Steven R. DePalma,Michael Parfenov,Jason Homsy,Jason Homsy,Joshua M. Gorham,Kathryn B. Manheimer,Matt Velinder,Andrew Farrell,Gabor T. Marth,Eric E. Schadt,Jonathan R. Kaltman,Jane W. Newburger,Alessandro Giardini,Elizabeth Goldmuntz,Martina Brueckner,Richard B. Kim,George A. Porter,Daniel Bernstein,Wendy K. Chung,Deepak Srivastava,Martin Tristani-Firouzi,Olga G. Troyanskaya,Diane E. Dickel,Yufeng Shen,Jonathan G. Seidman,Christine E. Seidman,Bruce D. Gelb +36 more
TL;DR: Computational analyses integrating whole-genome sequencing, cardiac epigenomic data and RNA-binding-protein data identify a role for noncoding de novo mutations in congenital heart disease.
Journal ArticleDOI
De novo variants in congenital diaphragmatic hernia identify MYRF as a new syndrome and reveal genetic overlaps with other developmental disorders.
Hongjian Qi,Lan Yu,Xueya Zhou,Julia Wynn,Haoquan Zhao,Yicheng Guo,Na Zhu,Alexander Kitaygorodsky,Rebecca Hernan,Gudrun Aspelund,Foong-Yen Lim,Timothy M. Crombleholme,Robert A. Cusick,Kenneth S. Azarow,Melissa E. Danko,Dai H. Chung,Brad W. Warner,George B. Mychaliska,Douglas A. Potoka,Amy J. Wagner,Mahmoud Elfiky,Jay M. Wilson,Deborah A. Nickerson,Michael J. Bamshad,Frances A. High,Mauro Longoni,Patricia K. Donahoe,Wendy K. Chung,Yufeng Shen +28 more
TL;DR: Analyzing the transcriptome of patient-derived diaphragm fibroblast cells suggest that disease associated variants abolish the transcription factor activity, and functional enrichment analysis implicates the disruption of regulation of gene expression, kinase activities, intra-cellular signaling, and cytoskeleton organization as pathogenic mechanisms in CDH.