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Karsten Schnatbaum

Researcher at Jerini

Publications -  44
Citations -  3681

Karsten Schnatbaum is an academic researcher from Jerini. The author has contributed to research in topics: Medicine & Proteome. The author has an hindex of 15, co-authored 40 publications receiving 2652 citations. Previous affiliations of Karsten Schnatbaum include University of Mainz.

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Mass-spectrometry-based draft of the human proteome

TL;DR: A mass-spectrometry-based draft of the human proteome and a public, high-performance, in-memory database for real-time analysis of terabytes of big data, called ProteomicsDB are presented, which enables navigation of proteomes, provides biological insight and fosters the development of proteomic technology.
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Prosit: proteome-wide prediction of peptide tandem mass spectra by deep learning.

TL;DR: A deep learning–based tool, Prosit, predicts high-quality peptide tandem mass spectra, improving peptide-identification performance compared with that of traditional proteomics analysis methods.
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A deep proteome and transcriptome abundance atlas of 29 healthy human tissues

TL;DR: A quantitative proteome and transcriptome abundance atlas of 29 paired healthy human tissues from the Human Protein Atlas project revealed that hundreds of proteins, particularly in testis, could not be detected even for highly expressed mRNAs and that protein expression is often more stable across tissues than that of transcripts.