M
Michael R. Sussman
Researcher at University of Wisconsin-Madison
Publications - 195
Citations - 21193
Michael R. Sussman is an academic researcher from University of Wisconsin-Madison. The author has contributed to research in topics: Arabidopsis & Arabidopsis thaliana. The author has an hindex of 73, co-authored 191 publications receiving 19330 citations. Previous affiliations of Michael R. Sussman include Wisconsin Alumni Research Foundation & Yale University.
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Proceedings ArticleDOI
New bioinformatics resources for metabolomics.
John L. Markley,Mark E. Anderson,Qiu Cui,Hamid R. Eghbalnia,Ian A. Lewis,Adrian D. Hegeman,Jing Li,Christopher F. Schulte,Michael R. Sussman,William M. Westler,Eldon L. Ulrich,Zsolt Zolnai +11 more
TL;DR: Two databases and a laboratory information system are developed intended to ease data analysis in both MS and NMR based metabolomics studies and to help coordinate research efforts in laboratories with high sample throughput and multiple investigators.
Journal ArticleDOI
Stable isotope assisted assignment of elemental compositions for metabolomics.
Adrian D. Hegeman,Christopher F. Schulte,Qiu Cui,Ian A. Lewis,Edward L. Huttlin,Hamid R. Eghbalnia,Amy C. Harms,Eldon L. Ulrich,John L. Markley,Michael R. Sussman +9 more
TL;DR: It is demonstrated that metabolic labeling can be used to provide additional constraints for higher confidence formula assignments over an extended mass range by analyzing exact mass measurement data from the four extracts using two methods.
Journal ArticleDOI
Prediction of error associated with false-positive rate determination for peptide identification in large-scale proteomics experiments using a combined reverse and forward peptide sequence database strategy.
TL;DR: An approach for calculating the expected uncertainty associated with false-positive rate determination using concatenated reverse and forward protein sequence databases is developed and compared with the results of experiments characterizing a series of mixtures containing known proteins.
Journal ArticleDOI
A Cytoplasmic Ca2+ Functional Assay for Identifying and Purifying Endogenous Cell Signaling Peptides in Arabidopsis Seedlings: Identification of AtRALF1 Peptide†
TL;DR: The data support a model in which the RALF peptide mediates Ca(2+)-dependent signaling events through a cell surface receptor, where it may play a role in eliciting events linked to stress responses or the modulation of growth.
Journal ArticleDOI
Insights into the role of DNA methylation in diatoms by genome-wide profiling in Phaeodactylum tricornutum
Alaguraj Veluchamy,Xin Lin,Xin Lin,Florian Maumus,Florian Maumus,Maximo Rivarola,Maximo Rivarola,Jaysheel Bhavsar,Todd Creasy,Kimberly O'Brien,Naomi Sengamalay,Luke J. Tallon,Andrew D. Smith,Edda Rayko,Ikhlak Ahmed,Stéphane Le Crom,Gregory K. Farrant,Jean-Yves Sgro,Sue A. Olson,Sandra Splinter BonDurant,Andrew E. Allen,Pablo D. Rabinowicz,Michael R. Sussman,Chris Bowler,Leila Tirichine +24 more
TL;DR: The first whole-genome methylome from a stramenopile, the marine model diatom Phaeodactylum tricornutum, is reported, finding extensive methylation in transposable elements and that genes with partial methylation tend to be constitutively expressed.