P
Pablo Tamayo
Researcher at University of California, San Diego
Publications - 185
Citations - 117545
Pablo Tamayo is an academic researcher from University of California, San Diego. The author has contributed to research in topics: Cancer & Gene. The author has an hindex of 72, co-authored 177 publications receiving 97318 citations. Previous affiliations of Pablo Tamayo include University of California, Berkeley & Harvard University.
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Journal ArticleDOI
Integrated genomic analysis of the 8q24 amplification in endometrial cancers identifies ATAD2 as essential to MYC-dependent cancers.
Maria B Raeder,Even Birkeland,Even Birkeland,Jone Trovik,Jone Trovik,Camilla Krakstad,Camilla Krakstad,Shyemaa Shehata,Steven E. Schumacher,Steven E. Schumacher,Travis I. Zack,Travis I. Zack,Antje Krohn,Henrica M.J. Werner,Henrica M.J. Werner,Susan Moody,Susan Moody,Elisabeth Wik,Elisabeth Wik,Ingunn M. Stefansson,Ingunn M. Stefansson,Frederik Holst,Anne Margrete Øyan,Anne Margrete Øyan,Pablo Tamayo,Jill P. Mesirov,Karl-Henning Kalland,Karl-Henning Kalland,Lars A. Akslen,Lars A. Akslen,Ronald Simon,Rameen Beroukhim,Rameen Beroukhim,Rameen Beroukhim,Helga B. Salvesen,Helga B. Salvesen +35 more
TL;DR: The data indicate high ATad2 expression is a marker of aggressive endometrial cancers, and suggest specific inhibitors of ATAD2 may have therapeutic utility in these and other MYC-dependent cancers.
Journal ArticleDOI
Role of Tet1/3 Genes and Chromatin Remodeling Genes in Cerebellar Circuit Formation
Xiaodong Zhu,David Girardo,Eve-Ellen Govek,Keisha John,Marian Mellén,Pablo Tamayo,Jill P. Mesirov,Mary E. Hatten +7 more
TL;DR: A role for Tet genes and chromatin remodeling genes in the formation of cerebellar circuitry is demonstrated using metagene analysis and it is demonstrated that Knockdown of Tet1 and Tet3 by RNAi in ex vivo cerebellary slice cultures inhibits dendritic arborization of developing GCs, a critical step in circuit formation.
Journal ArticleDOI
An Analytical Method for Multiclass Molecular Cancer Classification
Ryan Rifkin,Sayan Mukherjee,Pablo Tamayo,Sridhar Ramaswamy,Chen-Hsiang Yeang,Michael Angelo,Michael R. Reich,Tomaso Poggio,Eric S. Lander,Todd R. Golub,Jill P. Mesirov +10 more
TL;DR: In this paper, a computational methodology for multiclass prediction that combines class-specific (one vs. all) binary support vector machines was proposed for the diagnosis of multiple common adult malignancies using DNA microarray data.
Journal ArticleDOI
An RNA Profile Identifies Two Subsets of Multiple Sclerosis Patients Differing in Disease Activity
Linda Ottoboni,Linda Ottoboni,Linda Ottoboni,Brendan T. Keenan,Brendan T. Keenan,Pablo Tamayo,Manik Kuchroo,Jill P. Mesirov,Guy J. Buckle,Guy J. Buckle,Samia J. Khoury,Samia J. Khoury,David A. Hafler,David A. Hafler,Howard L. Weiner,Howard L. Weiner,Philip L. De Jager +16 more
TL;DR: A transcriptional signature from the peripheral blood of MS patients may be able to help identify individuals who are more likely to relapse when treated with first-line MS drugs and could become part of a tool to help neurologists identify those MS patients at higher risk of attacks.
Journal ArticleDOI
Visualizing and Interpreting Single-Cell Gene Expression Datasets with Similarity Weighted Nonnegative Embedding
Yan Wu,Pablo Tamayo,Kun Zhang +2 more
TL;DR: Cl similarity weighted nonnegative embedding (SWNE) is developed, which enhances interpretation of datasets by embedding the genes and factors that separate cell states on the visualization alongside the cells and maintains fidelity when visualizing local and global structure for both developmental trajectories and discrete cell types.