T
Tommaso Fontana
Researcher at Polytechnic University of Milan
Publications - 15
Citations - 188
Tommaso Fontana is an academic researcher from Polytechnic University of Milan. The author has contributed to research in topics: Computer science & Medicine. The author has an hindex of 3, co-authored 6 publications receiving 43 citations.
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Journal ArticleDOI
KG-COVID-19: A Framework to Produce Customized Knowledge Graphs for COVID-19 Response
Justin T. Reese,Deepak Unni,Tiffany J. Callahan,Luca Cappelletti,Vida Ravanmehr,Seth Carbon,Kent Shefchek,Benjamin M. Good,James P. Balhoff,Tommaso Fontana,Hannah Blau,Nicolas Matentzoglu,Nomi L. Harris,Monica Munoz-Torres,Monica Munoz-Torres,Melissa A. Haendel,Peter N. Robinson,Marcin P. Joachimiak,Christopher J. Mungall +18 more
TL;DR: KG-COVID-19 is created, a flexible framework that ingests and integrates heterogeneous biomedical data to produce knowledge graphs (KGs) and can be applied to other problems in which siloed biomedical data must be quickly integrated for different research applications, including future pandemics.
Journal ArticleDOI
Explainable Machine Learning for Early Assessment of COVID-19 Risk Prediction in Emergency Departments
Elena Casiraghi,Dario Malchiodi,Gabriella Trucco,Marco Frasca,Luca Cappelletti,Tommaso Fontana,Alessandro Andrea Esposito,Emanuele Avola,Alessandro Jachetti,Justin T. Reese,Alessandro Rizzi,Peter N. Robinson,Giorgio Valentini +12 more
TL;DR: Results show that the radiological score automatically computed through a neural network is highly correlated with the score computed by radiologists, and that laboratory variables, together with the number of comorbidities, aid risk prediction.
Posted ContentDOI
KG-COVID-19: a framework to produce customized knowledge graphs for COVID-19 response.
Justin T. Reese,Deepak Unni,Tiffany J. Callahan,Luca Cappelletti,Vida Ravanmehr,Seth Carbon,Tommaso Fontana,Hannah Blau,Nicolas Matentzoglu,Nomi L. Harris,Monica Munoz-Torres,Peter Robinson,Marcin P. Joachimiak,Christopher J. Mungall +13 more
TL;DR: KG-COVID-19 is a flexible framework that ingests and integrates biomedical data to produce knowledge graphs (KGs) that can be customized for downstream applications including machine learning tasks, hypothesis-based querying, and browsable user interface to enable researchers to explore CO VID-19 data and discover relationships.
Journal ArticleDOI
Generalisable long COVID subtypes: Findings from the NIH N3C and RECOVER programmes
J. Reese,Hannah Blau,Elena Casiraghi,Timothy Bergquist,Johanna Loomba,Tiffany J. Callahan,Bryan Laraway,Corneliu C. Antonescu,B. Coleman,Michael A. Gargano,Kenneth J. Wilkins,Luca Cappelletti,Tommaso Fontana,Nariman Ammar,Blessy Antony,T. M. Murali,J. Harry Caufield,Guy Karlebach,Julie A. McMurry,Andrew E. Williams,Richard A. Moffitt,Jineta Banerjee,Anthony Solomonides,Hannah Davis,Kristin Kostka,Giorgio Valentini,David Sahner,Christopher G. Chute,Charisse R. Madlock-Brown,Melissa A. Haendel,Peter N. Robinson,Heidi Spratt,Shyam Visweswaran,Joseph E. Flack,Yung Jae Yoo,Davera Gabriel,G. Caleb Alexander,Hemalkumar B. Mehta,Feifan Liu,Robert T. Miller,R. Wong,Elaine Hill,Lorna E. Thorpe,Jasmin Divers +43 more
TL;DR: In this article , a nonlinear similarity function is defined to map from a feature space of phenotypic abnormalities to a matrix of pairwise patient similarity that can be clustered using unsupervised machine learning.
Journal ArticleDOI
NSAID use and clinical outcomes in COVID-19 patients: a 38-center retrospective cohort study
J. Reese,B. Coleman,L. Chan,Hannah Blau,Tiffany J. Callahan,Luca Cappelletti,Tommaso Fontana,Katie Bradwell,Nomi L. Harris,Elena Casiraghi,Giorgio Valentini,Guy Karlebach,Rachel R Deer,Julie A. McMurry,Melissa A. Haendel,Christopher G. Chute,Emily R. Pfaff,Richard A. Moffitt,Heidi Spratt,Jasvinder A. Singh,Christopher J. Mungall,A E Williams,Peter N. Robinson +22 more
TL;DR: In this paper , a 38-center retrospective cohort study was performed that leveraged the harmonized, high-granularity electronic health record data of the National COVID Cohort Collaborative.